Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CDC42BPBQ9Y5S2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
CDC42BPBQ9Y5S2 MIR6089-201ENST00000616698 64 ntBASIC35.37■■■■□ 3.25
CDC42BPBQ9Y5S2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC35.37■■■■□ 3.25
CDC42BPBQ9Y5S2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
CDC42BPBQ9Y5S2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC35.37■■■■□ 3.25
CDC42BPBQ9Y5S2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
CDC42BPBQ9Y5S2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
CDC42BPBQ9Y5S2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
CDC42BPBQ9Y5S2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
CDC42BPBQ9Y5S2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC35.35■■■■□ 3.25
CDC42BPBQ9Y5S2 AC099791.1-201ENST00000416440 715 ntBASIC35.35■■■■□ 3.25
CDC42BPBQ9Y5S2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
CDC42BPBQ9Y5S2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC35.34■■■■□ 3.25
CDC42BPBQ9Y5S2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC35.34■■■■□ 3.25
CDC42BPBQ9Y5S2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
CDC42BPBQ9Y5S2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC35.34■■■■□ 3.25
CDC42BPBQ9Y5S2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC35.34■■■■□ 3.25
CDC42BPBQ9Y5S2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC35.33■■■■□ 3.25
CDC42BPBQ9Y5S2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CDC42BPBQ9Y5S2 AL138724.1-201ENST00000606771 1088 ntBASIC35.33■■■■□ 3.25
CDC42BPBQ9Y5S2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CDC42BPBQ9Y5S2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CDC42BPBQ9Y5S2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC35.32■■■■□ 3.25
CDC42BPBQ9Y5S2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC35.32■■■■□ 3.24
CDC42BPBQ9Y5S2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC35.32■■■■□ 3.24
CDC42BPBQ9Y5S2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
CDC42BPBQ9Y5S2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC35.32■■■■□ 3.24
CDC42BPBQ9Y5S2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC35.32■■■■□ 3.24
CDC42BPBQ9Y5S2 AC006455.2-201ENST00000429931 906 ntBASIC35.32■■■■□ 3.24
CDC42BPBQ9Y5S2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC35.32■■■■□ 3.24
CDC42BPBQ9Y5S2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
CDC42BPBQ9Y5S2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
CDC42BPBQ9Y5S2 REST-206ENST00000612429 1376 ntTSL 5 BASIC35.31■■■■□ 3.24
CDC42BPBQ9Y5S2 REST-207ENST00000616975 1370 ntTSL 5 BASIC35.31■■■■□ 3.24
CDC42BPBQ9Y5S2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC35.31■■■■□ 3.24
CDC42BPBQ9Y5S2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
CDC42BPBQ9Y5S2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC35.31■■■■□ 3.24
CDC42BPBQ9Y5S2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
CDC42BPBQ9Y5S2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
CDC42BPBQ9Y5S2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
CDC42BPBQ9Y5S2 AC092171.4-201ENST00000609130 632 ntBASIC35.3■■■■□ 3.24
CDC42BPBQ9Y5S2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
CDC42BPBQ9Y5S2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC35.3■■■■□ 3.24
CDC42BPBQ9Y5S2 AC009102.2-201ENST00000606772 1639 ntBASIC35.3■■■■□ 3.24
CDC42BPBQ9Y5S2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC35.3■■■■□ 3.24
CDC42BPBQ9Y5S2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC35.3■■■■□ 3.24
CDC42BPBQ9Y5S2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
CDC42BPBQ9Y5S2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
CDC42BPBQ9Y5S2 AC136469.2-201ENST00000623944 1028 ntBASIC35.29■■■■□ 3.24
CDC42BPBQ9Y5S2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
CDC42BPBQ9Y5S2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
CDC42BPBQ9Y5S2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC35.28■■■■□ 3.24
CDC42BPBQ9Y5S2 AC092803.2-201ENST00000564287 1899 ntBASIC35.28■■■■□ 3.24
CDC42BPBQ9Y5S2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
CDC42BPBQ9Y5S2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
CDC42BPBQ9Y5S2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC35.27■■■■□ 3.24
CDC42BPBQ9Y5S2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CDC42BPBQ9Y5S2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC35.27■■■■□ 3.24
CDC42BPBQ9Y5S2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC35.27■■■■□ 3.24
CDC42BPBQ9Y5S2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC35.27■■■■□ 3.24
CDC42BPBQ9Y5S2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC35.27■■■■□ 3.24
CDC42BPBQ9Y5S2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC35.27■■■■□ 3.24
CDC42BPBQ9Y5S2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC35.27■■■■□ 3.24
CDC42BPBQ9Y5S2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC35.27■■■■□ 3.24
CDC42BPBQ9Y5S2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC35.27■■■■□ 3.24
CDC42BPBQ9Y5S2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
CDC42BPBQ9Y5S2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC35.26■■■■□ 3.24
CDC42BPBQ9Y5S2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC35.26■■■■□ 3.24
CDC42BPBQ9Y5S2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
CDC42BPBQ9Y5S2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
CDC42BPBQ9Y5S2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC35.26■■■■□ 3.23
CDC42BPBQ9Y5S2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC35.26■■■■□ 3.23
CDC42BPBQ9Y5S2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC35.25■■■■□ 3.23
CDC42BPBQ9Y5S2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC35.25■■■■□ 3.23
CDC42BPBQ9Y5S2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC35.25■■■■□ 3.23
CDC42BPBQ9Y5S2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC35.25■■■■□ 3.23
CDC42BPBQ9Y5S2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC35.25■■■■□ 3.23
CDC42BPBQ9Y5S2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC35.25■■■■□ 3.23
CDC42BPBQ9Y5S2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
CDC42BPBQ9Y5S2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC35.24■■■■□ 3.23
CDC42BPBQ9Y5S2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
CDC42BPBQ9Y5S2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC35.24■■■■□ 3.23
CDC42BPBQ9Y5S2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC35.24■■■■□ 3.23
CDC42BPBQ9Y5S2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC35.24■■■■□ 3.23
CDC42BPBQ9Y5S2 AC008764.7-201ENST00000593779 1081 ntBASIC35.24■■■■□ 3.23
CDC42BPBQ9Y5S2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC35.23■■■■□ 3.23
CDC42BPBQ9Y5S2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC35.23■■■■□ 3.23
CDC42BPBQ9Y5S2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC35.23■■■■□ 3.23
CDC42BPBQ9Y5S2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC35.23■■■■□ 3.23
CDC42BPBQ9Y5S2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC35.23■■■■□ 3.23
CDC42BPBQ9Y5S2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
CDC42BPBQ9Y5S2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC35.23■■■■□ 3.23
CDC42BPBQ9Y5S2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
CDC42BPBQ9Y5S2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
CDC42BPBQ9Y5S2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC35.22■■■■□ 3.23
CDC42BPBQ9Y5S2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CDC42BPBQ9Y5S2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC35.22■■■■□ 3.23
CDC42BPBQ9Y5S2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC35.22■■■■□ 3.23
CDC42BPBQ9Y5S2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC35.21■■■■□ 3.23
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms