Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRCH1Q9Y2L9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LRCH1Q9Y2L9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.79■■□□□ 1.08
LRCH1Q9Y2L9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.79■■□□□ 1.08
LRCH1Q9Y2L9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.79■■□□□ 1.08
LRCH1Q9Y2L9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.79■■□□□ 1.08
LRCH1Q9Y2L9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LRCH1Q9Y2L9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRCH1Q9Y2L9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRCH1Q9Y2L9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRCH1Q9Y2L9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.78■■□□□ 1.08
LRCH1Q9Y2L9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.78■■□□□ 1.08
LRCH1Q9Y2L9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.78■■□□□ 1.08
LRCH1Q9Y2L9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.78■■□□□ 1.08
LRCH1Q9Y2L9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
LRCH1Q9Y2L9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.77■■□□□ 1.08
LRCH1Q9Y2L9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
LRCH1Q9Y2L9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRCH1Q9Y2L9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRCH1Q9Y2L9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRCH1Q9Y2L9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRCH1Q9Y2L9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.77■■□□□ 1.08
LRCH1Q9Y2L9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRCH1Q9Y2L9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LRCH1Q9Y2L9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.75■■□□□ 1.07
LRCH1Q9Y2L9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LRCH1Q9Y2L9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRCH1Q9Y2L9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
LRCH1Q9Y2L9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRCH1Q9Y2L9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.75■■□□□ 1.07
LRCH1Q9Y2L9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.75■■□□□ 1.07
LRCH1Q9Y2L9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRCH1Q9Y2L9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRCH1Q9Y2L9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.75■■□□□ 1.07
LRCH1Q9Y2L9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRCH1Q9Y2L9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRCH1Q9Y2L9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRCH1Q9Y2L9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.74■■□□□ 1.07
LRCH1Q9Y2L9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRCH1Q9Y2L9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.74■■□□□ 1.07
LRCH1Q9Y2L9 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.74■■□□□ 1.07
LRCH1Q9Y2L9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRCH1Q9Y2L9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRCH1Q9Y2L9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH1Q9Y2L9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.73■■□□□ 1.07
LRCH1Q9Y2L9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH1Q9Y2L9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH1Q9Y2L9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH1Q9Y2L9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH1Q9Y2L9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH1Q9Y2L9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH1Q9Y2L9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRCH1Q9Y2L9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH1Q9Y2L9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH1Q9Y2L9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH1Q9Y2L9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH1Q9Y2L9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH1Q9Y2L9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.72■■□□□ 1.07
LRCH1Q9Y2L9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LRCH1Q9Y2L9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH1Q9Y2L9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.71■■□□□ 1.07
LRCH1Q9Y2L9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH1Q9Y2L9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH1Q9Y2L9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH1Q9Y2L9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.71■■□□□ 1.07
LRCH1Q9Y2L9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LRCH1Q9Y2L9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRCH1Q9Y2L9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LRCH1Q9Y2L9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRCH1Q9Y2L9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRCH1Q9Y2L9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.7■■□□□ 1.06
LRCH1Q9Y2L9 MIR6089-201ENST00000616698 64 ntBASIC21.7■■□□□ 1.06
LRCH1Q9Y2L9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.7■■□□□ 1.06
LRCH1Q9Y2L9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
LRCH1Q9Y2L9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRCH1Q9Y2L9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRCH1Q9Y2L9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRCH1Q9Y2L9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH1Q9Y2L9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH1Q9Y2L9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LRCH1Q9Y2L9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.69■■□□□ 1.06
LRCH1Q9Y2L9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH1Q9Y2L9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH1Q9Y2L9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH1Q9Y2L9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms