Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
PCDHA4Q9UN74 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.38■■□□□ 1.81
PCDHA4Q9UN74 SNX5-217ENST00000606557 1087 ntBASIC26.38■■□□□ 1.81
PCDHA4Q9UN74 MIR4787-201ENST00000607364 84 ntBASIC26.38■■□□□ 1.81
PCDHA4Q9UN74 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHA4Q9UN74 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA4Q9UN74 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA4Q9UN74 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.37■■□□□ 1.81
PCDHA4Q9UN74 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA4Q9UN74 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA4Q9UN74 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA4Q9UN74 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA4Q9UN74 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.36■■□□□ 1.81
PCDHA4Q9UN74 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDHA4Q9UN74 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHA4Q9UN74 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.36■■□□□ 1.81
PCDHA4Q9UN74 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHA4Q9UN74 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDHA4Q9UN74 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
PCDHA4Q9UN74 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHA4Q9UN74 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHA4Q9UN74 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
PCDHA4Q9UN74 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHA4Q9UN74 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHA4Q9UN74 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.35■■□□□ 1.81
PCDHA4Q9UN74 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.35■■□□□ 1.81
PCDHA4Q9UN74 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHA4Q9UN74 AC092028.1-203ENST00000608262 953 ntBASIC26.35■■□□□ 1.81
PCDHA4Q9UN74 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA4Q9UN74 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA4Q9UN74 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA4Q9UN74 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDHA4Q9UN74 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA4Q9UN74 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.34■■□□□ 1.81
PCDHA4Q9UN74 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDHA4Q9UN74 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDHA4Q9UN74 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHA4Q9UN74 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.33■■□□□ 1.81
PCDHA4Q9UN74 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.33■■□□□ 1.81
PCDHA4Q9UN74 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHA4Q9UN74 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHA4Q9UN74 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHA4Q9UN74 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
PCDHA4Q9UN74 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
PCDHA4Q9UN74 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHA4Q9UN74 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHA4Q9UN74 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.33■■□□□ 1.8
PCDHA4Q9UN74 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PCDHA4Q9UN74 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHA4Q9UN74 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.32■■□□□ 1.8
PCDHA4Q9UN74 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHA4Q9UN74 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHA4Q9UN74 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHA4Q9UN74 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHA4Q9UN74 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.32■■□□□ 1.8
PCDHA4Q9UN74 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.32■■□□□ 1.8
PCDHA4Q9UN74 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.32■■□□□ 1.8
PCDHA4Q9UN74 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHA4Q9UN74 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHA4Q9UN74 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHA4Q9UN74 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHA4Q9UN74 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHA4Q9UN74 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.31■■□□□ 1.8
PCDHA4Q9UN74 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHA4Q9UN74 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA4Q9UN74 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA4Q9UN74 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA4Q9UN74 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.3■■□□□ 1.8
PCDHA4Q9UN74 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA4Q9UN74 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHA4Q9UN74 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.29■■□□□ 1.8
PCDHA4Q9UN74 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.29■■□□□ 1.8
PCDHA4Q9UN74 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHA4Q9UN74 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
PCDHA4Q9UN74 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHA4Q9UN74 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHA4Q9UN74 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHA4Q9UN74 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHA4Q9UN74 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
PCDHA4Q9UN74 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.28■■□□□ 1.8
PCDHA4Q9UN74 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
PCDHA4Q9UN74 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.28■■□□□ 1.8
PCDHA4Q9UN74 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHA4Q9UN74 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.28■■□□□ 1.8
PCDHA4Q9UN74 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHA4Q9UN74 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHA4Q9UN74 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHA4Q9UN74 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA4Q9UN74 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.27■■□□□ 1.8
PCDHA4Q9UN74 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA4Q9UN74 GUSBP5-201ENST00000418136 578 ntBASIC26.27■■□□□ 1.8
PCDHA4Q9UN74 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.27■■□□□ 1.8
PCDHA4Q9UN74 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
PCDHA4Q9UN74 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
PCDHA4Q9UN74 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
PCDHA4Q9UN74 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.27■■□□□ 1.8
PCDHA4Q9UN74 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA4Q9UN74 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA4Q9UN74 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.26■■□□□ 1.79
PCDHA4Q9UN74 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms