Protein–RNA interactions for Protein: Q9UJ94

LINC00527, Putative uncharacterized protein encoded by LINC00527, humanhuman

Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00527Q9UJ94 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00527Q9UJ94 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00527Q9UJ94 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00527Q9UJ94 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00527Q9UJ94 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC00527Q9UJ94 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.19■□□□□ 0.5
LINC00527Q9UJ94 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC00527Q9UJ94 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00527Q9UJ94 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.19■□□□□ 0.5
LINC00527Q9UJ94 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00527Q9UJ94 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00527Q9UJ94 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LINC00527Q9UJ94 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00527Q9UJ94 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LINC00527Q9UJ94 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC00527Q9UJ94 SNX5-217ENST00000606557 1087 ntBASIC18.18■□□□□ 0.5
LINC00527Q9UJ94 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
LINC00527Q9UJ94 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00527Q9UJ94 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00527Q9UJ94 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00527Q9UJ94 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.17■□□□□ 0.5
LINC00527Q9UJ94 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC00527Q9UJ94 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00527Q9UJ94 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.17■□□□□ 0.5
LINC00527Q9UJ94 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00527Q9UJ94 AC131274.2-201ENST00000580697 1507 ntBASIC18.17■□□□□ 0.5
LINC00527Q9UJ94 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.17■□□□□ 0.5
LINC00527Q9UJ94 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00527Q9UJ94 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00527Q9UJ94 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LINC00527Q9UJ94 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.16■□□□□ 0.5
LINC00527Q9UJ94 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00527Q9UJ94 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00527Q9UJ94 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LINC00527Q9UJ94 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.16■□□□□ 0.5
LINC00527Q9UJ94 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.16■□□□□ 0.5
LINC00527Q9UJ94 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00527Q9UJ94 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
LINC00527Q9UJ94 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LINC00527Q9UJ94 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00527Q9UJ94 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00527Q9UJ94 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC00527Q9UJ94 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC00527Q9UJ94 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00527Q9UJ94 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00527Q9UJ94 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00527Q9UJ94 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00527Q9UJ94 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC00527Q9UJ94 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00527Q9UJ94 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00527Q9UJ94 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LINC00527Q9UJ94 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC00527Q9UJ94 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00527Q9UJ94 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC00527Q9UJ94 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC00527Q9UJ94 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00527Q9UJ94 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00527Q9UJ94 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC00527Q9UJ94 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LINC00527Q9UJ94 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00527Q9UJ94 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00527Q9UJ94 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00527Q9UJ94 AL022069.1-201ENST00000568025 1636 ntBASIC18.12■□□□□ 0.49
LINC00527Q9UJ94 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00527Q9UJ94 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00527Q9UJ94 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00527Q9UJ94 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LINC00527Q9UJ94 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00527Q9UJ94 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00527Q9UJ94 AC004448.1-201ENST00000458332 883 ntBASIC18.12■□□□□ 0.49
LINC00527Q9UJ94 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LINC00527Q9UJ94 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00527Q9UJ94 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00527Q9UJ94 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00527Q9UJ94 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC00527Q9UJ94 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC00527Q9UJ94 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.11■□□□□ 0.49
LINC00527Q9UJ94 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LINC00527Q9UJ94 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LINC00527Q9UJ94 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00527Q9UJ94 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00527Q9UJ94 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00527Q9UJ94 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LINC00527Q9UJ94 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00527Q9UJ94 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 1288.2 ms