Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
THUMPD1Q9NXG2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
THUMPD1Q9NXG2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.55■■□□□ 1.04
THUMPD1Q9NXG2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
THUMPD1Q9NXG2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.55■■□□□ 1.04
THUMPD1Q9NXG2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
THUMPD1Q9NXG2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
THUMPD1Q9NXG2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.55■■□□□ 1.04
THUMPD1Q9NXG2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
THUMPD1Q9NXG2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
THUMPD1Q9NXG2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.54■■□□□ 1.04
THUMPD1Q9NXG2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
THUMPD1Q9NXG2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
THUMPD1Q9NXG2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
THUMPD1Q9NXG2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
THUMPD1Q9NXG2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
THUMPD1Q9NXG2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
THUMPD1Q9NXG2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.53■■□□□ 1.04
THUMPD1Q9NXG2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
THUMPD1Q9NXG2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
THUMPD1Q9NXG2 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.53■■□□□ 1.04
THUMPD1Q9NXG2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
THUMPD1Q9NXG2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
THUMPD1Q9NXG2 C9orf163-202ENST00000624034 2573 ntBASIC21.53■■□□□ 1.04
THUMPD1Q9NXG2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
THUMPD1Q9NXG2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.53■■□□□ 1.04
THUMPD1Q9NXG2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.53■■□□□ 1.04
THUMPD1Q9NXG2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
THUMPD1Q9NXG2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
THUMPD1Q9NXG2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
THUMPD1Q9NXG2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.52■■□□□ 1.04
THUMPD1Q9NXG2 AC011551.1-201ENST00000614101 683 ntBASIC21.52■■□□□ 1.04
THUMPD1Q9NXG2 U85056.1-201ENST00000616429 682 ntBASIC21.52■■□□□ 1.04
THUMPD1Q9NXG2 AC129492.7-201ENST00000622992 756 ntBASIC21.52■■□□□ 1.04
THUMPD1Q9NXG2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
THUMPD1Q9NXG2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
THUMPD1Q9NXG2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
THUMPD1Q9NXG2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
THUMPD1Q9NXG2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
THUMPD1Q9NXG2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
THUMPD1Q9NXG2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.51■■□□□ 1.03
THUMPD1Q9NXG2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
THUMPD1Q9NXG2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
THUMPD1Q9NXG2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
THUMPD1Q9NXG2 AC019171.1-201ENST00000601251 1056 ntBASIC21.51■■□□□ 1.03
THUMPD1Q9NXG2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.51■■□□□ 1.03
THUMPD1Q9NXG2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.51■■□□□ 1.03
THUMPD1Q9NXG2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.51■■□□□ 1.03
THUMPD1Q9NXG2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
THUMPD1Q9NXG2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
THUMPD1Q9NXG2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.51■■□□□ 1.03
THUMPD1Q9NXG2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
THUMPD1Q9NXG2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.51■■□□□ 1.03
THUMPD1Q9NXG2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
THUMPD1Q9NXG2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
THUMPD1Q9NXG2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
THUMPD1Q9NXG2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
THUMPD1Q9NXG2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
THUMPD1Q9NXG2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.5■■□□□ 1.03
THUMPD1Q9NXG2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
THUMPD1Q9NXG2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
THUMPD1Q9NXG2 AC022616.5-201ENST00000518796 181 ntBASIC21.5■■□□□ 1.03
THUMPD1Q9NXG2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
THUMPD1Q9NXG2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
THUMPD1Q9NXG2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
THUMPD1Q9NXG2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.49■■□□□ 1.03
THUMPD1Q9NXG2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
THUMPD1Q9NXG2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.49■■□□□ 1.03
THUMPD1Q9NXG2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
THUMPD1Q9NXG2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
THUMPD1Q9NXG2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.48■■□□□ 1.03
THUMPD1Q9NXG2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
THUMPD1Q9NXG2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
THUMPD1Q9NXG2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
THUMPD1Q9NXG2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.48■■□□□ 1.03
THUMPD1Q9NXG2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.48■■□□□ 1.03
THUMPD1Q9NXG2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.48■■□□□ 1.03
THUMPD1Q9NXG2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
THUMPD1Q9NXG2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
THUMPD1Q9NXG2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
THUMPD1Q9NXG2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
THUMPD1Q9NXG2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
THUMPD1Q9NXG2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.47■■□□□ 1.03
THUMPD1Q9NXG2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
THUMPD1Q9NXG2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
THUMPD1Q9NXG2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
THUMPD1Q9NXG2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
THUMPD1Q9NXG2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.47■■□□□ 1.03
THUMPD1Q9NXG2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.47■■□□□ 1.03
THUMPD1Q9NXG2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.47■■□□□ 1.03
THUMPD1Q9NXG2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
THUMPD1Q9NXG2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
THUMPD1Q9NXG2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
THUMPD1Q9NXG2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.46■■□□□ 1.03
THUMPD1Q9NXG2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
THUMPD1Q9NXG2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
THUMPD1Q9NXG2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
THUMPD1Q9NXG2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
THUMPD1Q9NXG2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
THUMPD1Q9NXG2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms