Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HPF1Q9NWY4 MIR6722-201ENST00000617286 78 ntBASIC21.24■□□□□ 0.99
HPF1Q9NWY4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.24■□□□□ 0.99
HPF1Q9NWY4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.24■□□□□ 0.99
HPF1Q9NWY4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPF1Q9NWY4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.24■□□□□ 0.99
HPF1Q9NWY4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
HPF1Q9NWY4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HPF1Q9NWY4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
HPF1Q9NWY4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.23■□□□□ 0.99
HPF1Q9NWY4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.23■□□□□ 0.99
HPF1Q9NWY4 AC004448.1-201ENST00000458332 883 ntBASIC21.23■□□□□ 0.99
HPF1Q9NWY4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.23■□□□□ 0.99
HPF1Q9NWY4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.23■□□□□ 0.99
HPF1Q9NWY4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HPF1Q9NWY4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.23■□□□□ 0.99
HPF1Q9NWY4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HPF1Q9NWY4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HPF1Q9NWY4 AC022211.4-201ENST00000625094 2161 ntBASIC21.23■□□□□ 0.99
HPF1Q9NWY4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.23■□□□□ 0.99
HPF1Q9NWY4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.23■□□□□ 0.99
HPF1Q9NWY4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.23■□□□□ 0.99
HPF1Q9NWY4 AC008406.3-201ENST00000620001 1374 ntBASIC21.23■□□□□ 0.99
HPF1Q9NWY4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HPF1Q9NWY4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HPF1Q9NWY4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HPF1Q9NWY4 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.22■□□□□ 0.99
HPF1Q9NWY4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.22■□□□□ 0.99
HPF1Q9NWY4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.22■□□□□ 0.99
HPF1Q9NWY4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HPF1Q9NWY4 AL356740.2-201ENST00000601559 647 ntBASIC21.22■□□□□ 0.99
HPF1Q9NWY4 AL117332.1-201ENST00000622628 974 ntBASIC21.22■□□□□ 0.99
HPF1Q9NWY4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HPF1Q9NWY4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.22■□□□□ 0.99
HPF1Q9NWY4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HPF1Q9NWY4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HPF1Q9NWY4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HPF1Q9NWY4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HPF1Q9NWY4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HPF1Q9NWY4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HPF1Q9NWY4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.2■□□□□ 0.98
HPF1Q9NWY4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.2■□□□□ 0.98
HPF1Q9NWY4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPF1Q9NWY4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPF1Q9NWY4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.19■□□□□ 0.98
HPF1Q9NWY4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.19■□□□□ 0.98
HPF1Q9NWY4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPF1Q9NWY4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.19■□□□□ 0.98
HPF1Q9NWY4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.19■□□□□ 0.98
HPF1Q9NWY4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPF1Q9NWY4 AL022069.1-201ENST00000568025 1636 ntBASIC21.18■□□□□ 0.98
HPF1Q9NWY4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HPF1Q9NWY4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.18■□□□□ 0.98
HPF1Q9NWY4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPF1Q9NWY4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPF1Q9NWY4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.18■□□□□ 0.98
HPF1Q9NWY4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.18■□□□□ 0.98
HPF1Q9NWY4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.18■□□□□ 0.98
HPF1Q9NWY4 MIR3621-201ENST00000580529 85 ntBASIC21.18■□□□□ 0.98
HPF1Q9NWY4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPF1Q9NWY4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.18■□□□□ 0.98
HPF1Q9NWY4 AC131274.2-201ENST00000580697 1507 ntBASIC21.18■□□□□ 0.98
HPF1Q9NWY4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.18■□□□□ 0.98
HPF1Q9NWY4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HPF1Q9NWY4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPF1Q9NWY4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPF1Q9NWY4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPF1Q9NWY4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPF1Q9NWY4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.17■□□□□ 0.98
HPF1Q9NWY4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.17■□□□□ 0.98
HPF1Q9NWY4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.17■□□□□ 0.98
HPF1Q9NWY4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
HPF1Q9NWY4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.17■□□□□ 0.98
HPF1Q9NWY4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPF1Q9NWY4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HPF1Q9NWY4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPF1Q9NWY4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HPF1Q9NWY4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPF1Q9NWY4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPF1Q9NWY4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPF1Q9NWY4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HPF1Q9NWY4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPF1Q9NWY4 AP003733.4-201ENST00000623785 1697 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms