Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 AC022211.4-201ENST00000625094 2161 ntBASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSBP3Q9BWW4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.12■□□□□ 0.65
SSBP3Q9BWW4 AC020928.2-201ENST00000588717 2197 ntBASIC19.12■□□□□ 0.65
SSBP3Q9BWW4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.12■□□□□ 0.65
SSBP3Q9BWW4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSBP3Q9BWW4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSBP3Q9BWW4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.12■□□□□ 0.65
SSBP3Q9BWW4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSBP3Q9BWW4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.12■□□□□ 0.65
SSBP3Q9BWW4 AL022069.1-201ENST00000568025 1636 ntBASIC19.11■□□□□ 0.65
SSBP3Q9BWW4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSBP3Q9BWW4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SSBP3Q9BWW4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.11■□□□□ 0.65
SSBP3Q9BWW4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.11■□□□□ 0.65
SSBP3Q9BWW4 MIR3621-201ENST00000580529 85 ntBASIC19.11■□□□□ 0.65
SSBP3Q9BWW4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSBP3Q9BWW4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSBP3Q9BWW4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSBP3Q9BWW4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSBP3Q9BWW4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SSBP3Q9BWW4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.1■□□□□ 0.65
SSBP3Q9BWW4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSBP3Q9BWW4 AC131274.2-201ENST00000580697 1507 ntBASIC19.1■□□□□ 0.65
SSBP3Q9BWW4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSBP3Q9BWW4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSBP3Q9BWW4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.1■□□□□ 0.65
SSBP3Q9BWW4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSBP3Q9BWW4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.1■□□□□ 0.65
SSBP3Q9BWW4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSBP3Q9BWW4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.1■□□□□ 0.65
SSBP3Q9BWW4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.1■□□□□ 0.65
SSBP3Q9BWW4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SSBP3Q9BWW4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.1■□□□□ 0.65
SSBP3Q9BWW4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SSBP3Q9BWW4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSBP3Q9BWW4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSBP3Q9BWW4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SSBP3Q9BWW4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSBP3Q9BWW4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSBP3Q9BWW4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.09■□□□□ 0.65
SSBP3Q9BWW4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.09■□□□□ 0.65
SSBP3Q9BWW4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.09■□□□□ 0.65
SSBP3Q9BWW4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSBP3Q9BWW4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.09■□□□□ 0.65
SSBP3Q9BWW4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSBP3Q9BWW4 AP003733.4-201ENST00000623785 1697 ntBASIC19.08■□□□□ 0.65
SSBP3Q9BWW4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSBP3Q9BWW4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSBP3Q9BWW4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSBP3Q9BWW4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSBP3Q9BWW4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SSBP3Q9BWW4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.08■□□□□ 0.64
SSBP3Q9BWW4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSBP3Q9BWW4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SSBP3Q9BWW4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SSBP3Q9BWW4 HLA-L-211ENST00000482052 1765 ntBASIC19.07■□□□□ 0.64
SSBP3Q9BWW4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSBP3Q9BWW4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SSBP3Q9BWW4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.07■□□□□ 0.64
SSBP3Q9BWW4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.07■□□□□ 0.64
SSBP3Q9BWW4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.07■□□□□ 0.64
SSBP3Q9BWW4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSBP3Q9BWW4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSBP3Q9BWW4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SSBP3Q9BWW4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSBP3Q9BWW4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSBP3Q9BWW4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSBP3Q9BWW4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSBP3Q9BWW4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSBP3Q9BWW4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.05■□□□□ 0.64
SSBP3Q9BWW4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSBP3Q9BWW4 AC142381.3-201ENST00000568208 1670 ntBASIC19.05■□□□□ 0.64
SSBP3Q9BWW4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSBP3Q9BWW4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSBP3Q9BWW4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSBP3Q9BWW4 AC131281.2-201ENST00000520478 145 ntBASIC19.05■□□□□ 0.64
SSBP3Q9BWW4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.05■□□□□ 0.64
SSBP3Q9BWW4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms