Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF5Q99942 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF5Q99942 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
RNF5Q99942 KRT8P33-201ENST00000508125 1423 ntBASIC18.39■□□□□ 0.53
RNF5Q99942 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF5Q99942 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF5Q99942 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF5Q99942 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF5Q99942 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.38■□□□□ 0.53
RNF5Q99942 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF5Q99942 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF5Q99942 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF5Q99942 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF5Q99942 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RNF5Q99942 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF5Q99942 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF5Q99942 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF5Q99942 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF5Q99942 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF5Q99942 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF5Q99942 AC004448.1-201ENST00000458332 883 ntBASIC18.37■□□□□ 0.53
RNF5Q99942 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF5Q99942 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF5Q99942 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF5Q99942 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF5Q99942 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF5Q99942 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF5Q99942 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF5Q99942 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF5Q99942 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF5Q99942 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF5Q99942 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF5Q99942 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF5Q99942 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNF5Q99942 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF5Q99942 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF5Q99942 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF5Q99942 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF5Q99942 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF5Q99942 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF5Q99942 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF5Q99942 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF5Q99942 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF5Q99942 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF5Q99942 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF5Q99942 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF5Q99942 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF5Q99942 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF5Q99942 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF5Q99942 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF5Q99942 ALDH1A3-203ENST00000557963 1670 ntBASIC18.34■□□□□ 0.53
RNF5Q99942 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RNF5Q99942 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF5Q99942 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF5Q99942 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF5Q99942 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF5Q99942 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF5Q99942 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF5Q99942 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF5Q99942 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF5Q99942 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF5Q99942 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF5Q99942 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF5Q99942 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF5Q99942 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF5Q99942 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF5Q99942 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF5Q99942 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF5Q99942 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RNF5Q99942 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RNF5Q99942 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RNF5Q99942 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF5Q99942 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF5Q99942 ABCB10P4-201ENST00000566803 2184 ntBASIC18.32■□□□□ 0.52
RNF5Q99942 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF5Q99942 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF5Q99942 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF5Q99942 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF5Q99942 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF5Q99942 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF5Q99942 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF5Q99942 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF5Q99942 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF5Q99942 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF5Q99942 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF5Q99942 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF5Q99942 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF5Q99942 BX664725.1-201ENST00000438252 379 ntBASIC18.31■□□□□ 0.52
RNF5Q99942 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RNF5Q99942 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF5Q99942 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RNF5Q99942 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RNF5Q99942 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF5Q99942 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF5Q99942 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF5Q99942 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RNF5Q99942 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF5Q99942 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF5Q99942 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF5Q99942 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms