Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDK5RAP1Q96SZ6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.96■■□□□ 1.43
CDK5RAP1Q96SZ6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDK5RAP1Q96SZ6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.95■■□□□ 1.43
CDK5RAP1Q96SZ6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
CDK5RAP1Q96SZ6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
CDK5RAP1Q96SZ6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDK5RAP1Q96SZ6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDK5RAP1Q96SZ6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDK5RAP1Q96SZ6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDK5RAP1Q96SZ6 AC020928.2-201ENST00000588717 2197 ntBASIC23.94■■□□□ 1.42
CDK5RAP1Q96SZ6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.94■■□□□ 1.42
CDK5RAP1Q96SZ6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.94■■□□□ 1.42
CDK5RAP1Q96SZ6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDK5RAP1Q96SZ6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDK5RAP1Q96SZ6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDK5RAP1Q96SZ6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
CDK5RAP1Q96SZ6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDK5RAP1Q96SZ6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDK5RAP1Q96SZ6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDK5RAP1Q96SZ6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CDK5RAP1Q96SZ6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDK5RAP1Q96SZ6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDK5RAP1Q96SZ6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CDK5RAP1Q96SZ6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.93■■□□□ 1.42
CDK5RAP1Q96SZ6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.93■■□□□ 1.42
CDK5RAP1Q96SZ6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.93■■□□□ 1.42
CDK5RAP1Q96SZ6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.93■■□□□ 1.42
CDK5RAP1Q96SZ6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDK5RAP1Q96SZ6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDK5RAP1Q96SZ6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CDK5RAP1Q96SZ6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK5RAP1Q96SZ6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK5RAP1Q96SZ6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK5RAP1Q96SZ6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK5RAP1Q96SZ6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.92■■□□□ 1.42
CDK5RAP1Q96SZ6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CDK5RAP1Q96SZ6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.92■■□□□ 1.42
CDK5RAP1Q96SZ6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.92■■□□□ 1.42
CDK5RAP1Q96SZ6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK5RAP1Q96SZ6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.92■■□□□ 1.42
CDK5RAP1Q96SZ6 AC138932.3-201ENST00000567634 1902 ntBASIC23.92■■□□□ 1.42
CDK5RAP1Q96SZ6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK5RAP1Q96SZ6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5RAP1Q96SZ6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5RAP1Q96SZ6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.91■■□□□ 1.42
CDK5RAP1Q96SZ6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5RAP1Q96SZ6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5RAP1Q96SZ6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CDK5RAP1Q96SZ6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CDK5RAP1Q96SZ6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.9■■□□□ 1.42
CDK5RAP1Q96SZ6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CDK5RAP1Q96SZ6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.9■■□□□ 1.42
CDK5RAP1Q96SZ6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDK5RAP1Q96SZ6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDK5RAP1Q96SZ6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.9■■□□□ 1.42
CDK5RAP1Q96SZ6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDK5RAP1Q96SZ6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.9■■□□□ 1.42
CDK5RAP1Q96SZ6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDK5RAP1Q96SZ6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDK5RAP1Q96SZ6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.9■■□□□ 1.42
CDK5RAP1Q96SZ6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDK5RAP1Q96SZ6 AC131281.2-201ENST00000520478 145 ntBASIC23.89■■□□□ 1.41
CDK5RAP1Q96SZ6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDK5RAP1Q96SZ6 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.89■■□□□ 1.41
CDK5RAP1Q96SZ6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.89■■□□□ 1.41
CDK5RAP1Q96SZ6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDK5RAP1Q96SZ6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDK5RAP1Q96SZ6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
CDK5RAP1Q96SZ6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDK5RAP1Q96SZ6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDK5RAP1Q96SZ6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.88■■□□□ 1.41
CDK5RAP1Q96SZ6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDK5RAP1Q96SZ6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.88■■□□□ 1.41
CDK5RAP1Q96SZ6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDK5RAP1Q96SZ6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDK5RAP1Q96SZ6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CDK5RAP1Q96SZ6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5RAP1Q96SZ6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5RAP1Q96SZ6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5RAP1Q96SZ6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.87■■□□□ 1.41
CDK5RAP1Q96SZ6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5RAP1Q96SZ6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5RAP1Q96SZ6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.87■■□□□ 1.41
CDK5RAP1Q96SZ6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5RAP1Q96SZ6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5RAP1Q96SZ6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.86■■□□□ 1.41
CDK5RAP1Q96SZ6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5RAP1Q96SZ6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5RAP1Q96SZ6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5RAP1Q96SZ6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.86■■□□□ 1.41
CDK5RAP1Q96SZ6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5RAP1Q96SZ6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDK5RAP1Q96SZ6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDK5RAP1Q96SZ6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDK5RAP1Q96SZ6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CDK5RAP1Q96SZ6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK5RAP1Q96SZ6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.84■■□□□ 1.41
CDK5RAP1Q96SZ6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.84■■□□□ 1.41
CDK5RAP1Q96SZ6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms