Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SH3RF2Q8TEC5 AC131274.2-201ENST00000580697 1507 ntBASIC23.94■■□□□ 1.42
SH3RF2Q8TEC5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
SH3RF2Q8TEC5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SH3RF2Q8TEC5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SH3RF2Q8TEC5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.94■■□□□ 1.42
SH3RF2Q8TEC5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.94■■□□□ 1.42
SH3RF2Q8TEC5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.94■■□□□ 1.42
SH3RF2Q8TEC5 AC135731.1-201ENST00000569415 2548 ntBASIC23.94■■□□□ 1.42
SH3RF2Q8TEC5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SH3RF2Q8TEC5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SH3RF2Q8TEC5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SH3RF2Q8TEC5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SH3RF2Q8TEC5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.93■■□□□ 1.42
SH3RF2Q8TEC5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.93■■□□□ 1.42
SH3RF2Q8TEC5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SH3RF2Q8TEC5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SH3RF2Q8TEC5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SH3RF2Q8TEC5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SH3RF2Q8TEC5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SH3RF2Q8TEC5 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SH3RF2Q8TEC5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.92■■□□□ 1.42
SH3RF2Q8TEC5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
SH3RF2Q8TEC5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.92■■□□□ 1.42
SH3RF2Q8TEC5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SH3RF2Q8TEC5 AC005703.6-201ENST00000623265 1329 ntBASIC23.91■■□□□ 1.42
SH3RF2Q8TEC5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.91■■□□□ 1.42
SH3RF2Q8TEC5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.91■■□□□ 1.42
SH3RF2Q8TEC5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.91■■□□□ 1.42
SH3RF2Q8TEC5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SH3RF2Q8TEC5 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SH3RF2Q8TEC5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SH3RF2Q8TEC5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SH3RF2Q8TEC5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SH3RF2Q8TEC5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SH3RF2Q8TEC5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.9■■□□□ 1.42
SH3RF2Q8TEC5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SH3RF2Q8TEC5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SH3RF2Q8TEC5 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SH3RF2Q8TEC5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.89■■□□□ 1.41
SH3RF2Q8TEC5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.89■■□□□ 1.41
SH3RF2Q8TEC5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.89■■□□□ 1.41
SH3RF2Q8TEC5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SH3RF2Q8TEC5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SH3RF2Q8TEC5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
SH3RF2Q8TEC5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
SH3RF2Q8TEC5 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.89■■□□□ 1.41
SH3RF2Q8TEC5 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.89■■□□□ 1.41
SH3RF2Q8TEC5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SH3RF2Q8TEC5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.89■■□□□ 1.41
SH3RF2Q8TEC5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SH3RF2Q8TEC5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SH3RF2Q8TEC5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.88■■□□□ 1.41
SH3RF2Q8TEC5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SH3RF2Q8TEC5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SH3RF2Q8TEC5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.88■■□□□ 1.41
SH3RF2Q8TEC5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.88■■□□□ 1.41
SH3RF2Q8TEC5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
SH3RF2Q8TEC5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SH3RF2Q8TEC5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
SH3RF2Q8TEC5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
SH3RF2Q8TEC5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SH3RF2Q8TEC5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.87■■□□□ 1.41
SH3RF2Q8TEC5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
SH3RF2Q8TEC5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SH3RF2Q8TEC5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SH3RF2Q8TEC5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SH3RF2Q8TEC5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SH3RF2Q8TEC5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.87■■□□□ 1.41
SH3RF2Q8TEC5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.87■■□□□ 1.41
SH3RF2Q8TEC5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SH3RF2Q8TEC5 AC005837.3-201ENST00000612163 286 ntBASIC23.87■■□□□ 1.41
SH3RF2Q8TEC5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SH3RF2Q8TEC5 MIR935-201ENST00000401179 91 ntBASIC23.86■■□□□ 1.41
SH3RF2Q8TEC5 SRD5A1P1-201ENST00000442297 786 ntBASIC23.86■■□□□ 1.41
SH3RF2Q8TEC5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.86■■□□□ 1.41
SH3RF2Q8TEC5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.86■■□□□ 1.41
SH3RF2Q8TEC5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SH3RF2Q8TEC5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SH3RF2Q8TEC5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
SH3RF2Q8TEC5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
SH3RF2Q8TEC5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
SH3RF2Q8TEC5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.85■■□□□ 1.41
SH3RF2Q8TEC5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.85■■□□□ 1.41
SH3RF2Q8TEC5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SH3RF2Q8TEC5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SH3RF2Q8TEC5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3RF2Q8TEC5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
SH3RF2Q8TEC5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.84■■□□□ 1.41
SH3RF2Q8TEC5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
SH3RF2Q8TEC5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.84■■□□□ 1.41
SH3RF2Q8TEC5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.84■■□□□ 1.41
SH3RF2Q8TEC5 AL022069.1-201ENST00000568025 1636 ntBASIC23.84■■□□□ 1.41
SH3RF2Q8TEC5 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3RF2Q8TEC5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SH3RF2Q8TEC5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SH3RF2Q8TEC5 PBX2P1-201ENST00000493219 1291 ntBASIC23.83■■□□□ 1.41
SH3RF2Q8TEC5 AC133561.4-201ENST00000566112 224 ntBASIC23.83■■□□□ 1.41
SH3RF2Q8TEC5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SH3RF2Q8TEC5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms