Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
UBA3Q8TBC4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.38■■□□□ 1.49
UBA3Q8TBC4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
UBA3Q8TBC4 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.38■■□□□ 1.49
UBA3Q8TBC4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.38■■□□□ 1.49
UBA3Q8TBC4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
UBA3Q8TBC4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.38■■□□□ 1.49
UBA3Q8TBC4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
UBA3Q8TBC4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.37■■□□□ 1.49
UBA3Q8TBC4 AC004812.2-201ENST00000611079 2094 ntBASIC24.37■■□□□ 1.49
UBA3Q8TBC4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
UBA3Q8TBC4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
UBA3Q8TBC4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
UBA3Q8TBC4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
UBA3Q8TBC4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
UBA3Q8TBC4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBA3Q8TBC4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBA3Q8TBC4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.36■■□□□ 1.49
UBA3Q8TBC4 AC092028.1-203ENST00000608262 953 ntBASIC24.36■■□□□ 1.49
UBA3Q8TBC4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.36■■□□□ 1.49
UBA3Q8TBC4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.36■■□□□ 1.49
UBA3Q8TBC4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.36■■□□□ 1.49
UBA3Q8TBC4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBA3Q8TBC4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
UBA3Q8TBC4 AC141586.4-201ENST00000624558 1573 ntBASIC24.36■■□□□ 1.49
UBA3Q8TBC4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.36■■□□□ 1.49
UBA3Q8TBC4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.35■■□□□ 1.49
UBA3Q8TBC4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.35■■□□□ 1.49
UBA3Q8TBC4 AC093323.1-202ENST00000635031 2045 ntBASIC24.35■■□□□ 1.49
UBA3Q8TBC4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
UBA3Q8TBC4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBA3Q8TBC4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBA3Q8TBC4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBA3Q8TBC4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.35■■□□□ 1.49
UBA3Q8TBC4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.35■■□□□ 1.49
UBA3Q8TBC4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.35■■□□□ 1.49
UBA3Q8TBC4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBA3Q8TBC4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
UBA3Q8TBC4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBA3Q8TBC4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
UBA3Q8TBC4 SNX5-217ENST00000606557 1087 ntBASIC24.34■■□□□ 1.49
UBA3Q8TBC4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBA3Q8TBC4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBA3Q8TBC4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
UBA3Q8TBC4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.33■■□□□ 1.49
UBA3Q8TBC4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.33■■□□□ 1.49
UBA3Q8TBC4 AC004448.1-201ENST00000458332 883 ntBASIC24.33■■□□□ 1.49
UBA3Q8TBC4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.33■■□□□ 1.49
UBA3Q8TBC4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
UBA3Q8TBC4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBA3Q8TBC4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBA3Q8TBC4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBA3Q8TBC4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
UBA3Q8TBC4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.32■■□□□ 1.48
UBA3Q8TBC4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.32■■□□□ 1.48
UBA3Q8TBC4 TSPY9P-201ENST00000440215 945 ntBASIC24.32■■□□□ 1.48
UBA3Q8TBC4 TSPY11P-201ENST00000442607 1045 ntBASIC24.32■■□□□ 1.48
UBA3Q8TBC4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
UBA3Q8TBC4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
UBA3Q8TBC4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBA3Q8TBC4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.32■■□□□ 1.48
UBA3Q8TBC4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
UBA3Q8TBC4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
UBA3Q8TBC4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
UBA3Q8TBC4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
UBA3Q8TBC4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
UBA3Q8TBC4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.31■■□□□ 1.48
UBA3Q8TBC4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.31■■□□□ 1.48
UBA3Q8TBC4 GUSBP5-201ENST00000418136 578 ntBASIC24.31■■□□□ 1.48
UBA3Q8TBC4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.31■■□□□ 1.48
UBA3Q8TBC4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBA3Q8TBC4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
UBA3Q8TBC4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.3■■□□□ 1.48
UBA3Q8TBC4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
UBA3Q8TBC4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
UBA3Q8TBC4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
UBA3Q8TBC4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
UBA3Q8TBC4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
UBA3Q8TBC4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
UBA3Q8TBC4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.29■■□□□ 1.48
UBA3Q8TBC4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
UBA3Q8TBC4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
UBA3Q8TBC4 ABCB10P4-201ENST00000566803 2184 ntBASIC24.28■■□□□ 1.48
UBA3Q8TBC4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
UBA3Q8TBC4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
UBA3Q8TBC4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.28■■□□□ 1.48
UBA3Q8TBC4 UNC93B8-201ENST00000511903 705 ntBASIC24.28■■□□□ 1.48
UBA3Q8TBC4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.28■■□□□ 1.48
UBA3Q8TBC4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.28■■□□□ 1.48
UBA3Q8TBC4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.28■■□□□ 1.48
UBA3Q8TBC4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
UBA3Q8TBC4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.28■■□□□ 1.48
UBA3Q8TBC4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
UBA3Q8TBC4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
UBA3Q8TBC4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.28■■□□□ 1.48
UBA3Q8TBC4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
UBA3Q8TBC4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
UBA3Q8TBC4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
UBA3Q8TBC4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
UBA3Q8TBC4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms