Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.76■■□□□ 1.07
SNIP1Q8TAD8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.76■■□□□ 1.07
SNIP1Q8TAD8 AC136469.2-201ENST00000623944 1028 ntBASIC21.76■■□□□ 1.07
SNIP1Q8TAD8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNIP1Q8TAD8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.76■■□□□ 1.07
SNIP1Q8TAD8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNIP1Q8TAD8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.76■■□□□ 1.07
SNIP1Q8TAD8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNIP1Q8TAD8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNIP1Q8TAD8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNIP1Q8TAD8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.75■■□□□ 1.07
SNIP1Q8TAD8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNIP1Q8TAD8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.75■■□□□ 1.07
SNIP1Q8TAD8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNIP1Q8TAD8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNIP1Q8TAD8 KRT18P5-201ENST00000436075 1291 ntBASIC21.75■■□□□ 1.07
SNIP1Q8TAD8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNIP1Q8TAD8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNIP1Q8TAD8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.74■■□□□ 1.07
SNIP1Q8TAD8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNIP1Q8TAD8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.74■■□□□ 1.07
SNIP1Q8TAD8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.74■■□□□ 1.07
SNIP1Q8TAD8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.74■■□□□ 1.07
SNIP1Q8TAD8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNIP1Q8TAD8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNIP1Q8TAD8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNIP1Q8TAD8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.74■■□□□ 1.07
SNIP1Q8TAD8 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.74■■□□□ 1.07
SNIP1Q8TAD8 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.74■■□□□ 1.07
SNIP1Q8TAD8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNIP1Q8TAD8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNIP1Q8TAD8 YBX1P1-201ENST00000445822 960 ntBASIC21.73■■□□□ 1.07
SNIP1Q8TAD8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.73■■□□□ 1.07
SNIP1Q8TAD8 AC233992.3-201ENST00000607491 485 ntBASIC21.73■■□□□ 1.07
SNIP1Q8TAD8 AC092437.1-201ENST00000624794 1048 ntBASIC21.73■■□□□ 1.07
SNIP1Q8TAD8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNIP1Q8TAD8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNIP1Q8TAD8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNIP1Q8TAD8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.72■■□□□ 1.07
SNIP1Q8TAD8 ID1-201ENST00000376105 1233 ntBASIC21.72■■□□□ 1.07
SNIP1Q8TAD8 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.72■■□□□ 1.07
SNIP1Q8TAD8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.72■■□□□ 1.07
SNIP1Q8TAD8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNIP1Q8TAD8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNIP1Q8TAD8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.72■■□□□ 1.07
SNIP1Q8TAD8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNIP1Q8TAD8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNIP1Q8TAD8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNIP1Q8TAD8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNIP1Q8TAD8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.71■■□□□ 1.07
SNIP1Q8TAD8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SNIP1Q8TAD8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNIP1Q8TAD8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNIP1Q8TAD8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNIP1Q8TAD8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNIP1Q8TAD8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNIP1Q8TAD8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.71■■□□□ 1.07
SNIP1Q8TAD8 BX842568.3-201ENST00000418104 571 ntBASIC21.71■■□□□ 1.07
SNIP1Q8TAD8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNIP1Q8TAD8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.71■■□□□ 1.07
SNIP1Q8TAD8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNIP1Q8TAD8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
SNIP1Q8TAD8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNIP1Q8TAD8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNIP1Q8TAD8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNIP1Q8TAD8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.7■■□□□ 1.06
SNIP1Q8TAD8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNIP1Q8TAD8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNIP1Q8TAD8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.69■■□□□ 1.06
SNIP1Q8TAD8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNIP1Q8TAD8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNIP1Q8TAD8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNIP1Q8TAD8 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.69■■□□□ 1.06
SNIP1Q8TAD8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.69■■□□□ 1.06
SNIP1Q8TAD8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.69■■□□□ 1.06
SNIP1Q8TAD8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
SNIP1Q8TAD8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNIP1Q8TAD8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNIP1Q8TAD8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.69■■□□□ 1.06
SNIP1Q8TAD8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SNIP1Q8TAD8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNIP1Q8TAD8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.68■■□□□ 1.06
SNIP1Q8TAD8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
SNIP1Q8TAD8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNIP1Q8TAD8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.68■■□□□ 1.06
SNIP1Q8TAD8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNIP1Q8TAD8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.68■■□□□ 1.06
SNIP1Q8TAD8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.68■■□□□ 1.06
SNIP1Q8TAD8 AC241377.3-202ENST00000626088 1088 ntBASIC21.68■■□□□ 1.06
SNIP1Q8TAD8 AC241585.3-202ENST00000628937 1088 ntBASIC21.68■■□□□ 1.06
SNIP1Q8TAD8 AC245100.8-202ENST00000629247 1058 ntBASIC21.68■■□□□ 1.06
SNIP1Q8TAD8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SNIP1Q8TAD8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNIP1Q8TAD8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNIP1Q8TAD8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNIP1Q8TAD8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNIP1Q8TAD8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNIP1Q8TAD8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNIP1Q8TAD8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNIP1Q8TAD8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms