Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
COL22A1Q8NFW1 AC009102.2-201ENST00000606772 1639 ntBASIC31.39■■■□□ 2.62
COL22A1Q8NFW1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
COL22A1Q8NFW1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
COL22A1Q8NFW1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC31.38■■■□□ 2.61
COL22A1Q8NFW1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
COL22A1Q8NFW1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC31.38■■■□□ 2.61
COL22A1Q8NFW1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC31.38■■■□□ 2.61
COL22A1Q8NFW1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC31.38■■■□□ 2.61
COL22A1Q8NFW1 AC123595.1-201ENST00000440769 1046 ntBASIC31.38■■■□□ 2.61
COL22A1Q8NFW1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC31.38■■■□□ 2.61
COL22A1Q8NFW1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC31.38■■■□□ 2.61
COL22A1Q8NFW1 AC241377.3-202ENST00000626088 1088 ntBASIC31.38■■■□□ 2.61
COL22A1Q8NFW1 AC241585.3-202ENST00000628937 1088 ntBASIC31.38■■■□□ 2.61
COL22A1Q8NFW1 AC245100.8-202ENST00000629247 1058 ntBASIC31.38■■■□□ 2.61
COL22A1Q8NFW1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
COL22A1Q8NFW1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
COL22A1Q8NFW1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
COL22A1Q8NFW1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
COL22A1Q8NFW1 HLA-L-209ENST00000420110 1011 ntBASIC31.37■■■□□ 2.61
COL22A1Q8NFW1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC31.37■■■□□ 2.61
COL22A1Q8NFW1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
COL22A1Q8NFW1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC31.37■■■□□ 2.61
COL22A1Q8NFW1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
COL22A1Q8NFW1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
COL22A1Q8NFW1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC31.36■■■□□ 2.61
COL22A1Q8NFW1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
COL22A1Q8NFW1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
COL22A1Q8NFW1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
COL22A1Q8NFW1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC31.35■■■□□ 2.61
COL22A1Q8NFW1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC31.35■■■□□ 2.61
COL22A1Q8NFW1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
COL22A1Q8NFW1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
COL22A1Q8NFW1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
COL22A1Q8NFW1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC31.35■■■□□ 2.61
COL22A1Q8NFW1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC31.34■■■□□ 2.61
COL22A1Q8NFW1 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.34■■■□□ 2.61
COL22A1Q8NFW1 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.34■■■□□ 2.61
COL22A1Q8NFW1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC31.34■■■□□ 2.61
COL22A1Q8NFW1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
COL22A1Q8NFW1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC31.34■■■□□ 2.61
COL22A1Q8NFW1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
COL22A1Q8NFW1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
COL22A1Q8NFW1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
COL22A1Q8NFW1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
COL22A1Q8NFW1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
COL22A1Q8NFW1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
COL22A1Q8NFW1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC31.33■■■□□ 2.61
COL22A1Q8NFW1 AC012414.1-201ENST00000556676 535 ntBASIC31.33■■■□□ 2.61
COL22A1Q8NFW1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
COL22A1Q8NFW1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
COL22A1Q8NFW1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC31.32■■■□□ 2.6
COL22A1Q8NFW1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.32■■■□□ 2.6
COL22A1Q8NFW1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC31.32■■■□□ 2.6
COL22A1Q8NFW1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC31.31■■■□□ 2.6
COL22A1Q8NFW1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
COL22A1Q8NFW1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
COL22A1Q8NFW1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC31.31■■■□□ 2.6
COL22A1Q8NFW1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
COL22A1Q8NFW1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
COL22A1Q8NFW1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.3■■■□□ 2.6
COL22A1Q8NFW1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.3■■■□□ 2.6
COL22A1Q8NFW1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.3■■■□□ 2.6
COL22A1Q8NFW1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.3■■■□□ 2.6
COL22A1Q8NFW1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
COL22A1Q8NFW1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
COL22A1Q8NFW1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
COL22A1Q8NFW1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL22A1Q8NFW1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL22A1Q8NFW1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
COL22A1Q8NFW1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
COL22A1Q8NFW1 AL358852.1-201ENST00000623174 1268 ntBASIC31.29■■■□□ 2.6
COL22A1Q8NFW1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL22A1Q8NFW1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
COL22A1Q8NFW1 TSPY26P-201ENST00000476365 1326 ntBASIC31.29■■■□□ 2.6
COL22A1Q8NFW1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
COL22A1Q8NFW1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
COL22A1Q8NFW1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
COL22A1Q8NFW1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
COL22A1Q8NFW1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
COL22A1Q8NFW1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
COL22A1Q8NFW1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC31.27■■■□□ 2.6
COL22A1Q8NFW1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
COL22A1Q8NFW1 CCDC92B-201ENST00000575506 885 ntBASIC31.27■■■□□ 2.6
COL22A1Q8NFW1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC31.27■■■□□ 2.6
COL22A1Q8NFW1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
COL22A1Q8NFW1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
COL22A1Q8NFW1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
COL22A1Q8NFW1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
COL22A1Q8NFW1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC31.26■■■□□ 2.6
COL22A1Q8NFW1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
COL22A1Q8NFW1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
COL22A1Q8NFW1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
COL22A1Q8NFW1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
COL22A1Q8NFW1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
COL22A1Q8NFW1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
COL22A1Q8NFW1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.25■■■□□ 2.59
COL22A1Q8NFW1 MIR3181-201ENST00000578512 73 ntBASIC31.25■■■□□ 2.59
COL22A1Q8NFW1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
COL22A1Q8NFW1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms