Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SHCBP1Q8NEM2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.38■■□□□ 1.81
SHCBP1Q8NEM2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SHCBP1Q8NEM2 AC091305.1-201ENST00000479476 895 ntBASIC26.38■■□□□ 1.81
SHCBP1Q8NEM2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SHCBP1Q8NEM2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SHCBP1Q8NEM2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
SHCBP1Q8NEM2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SHCBP1Q8NEM2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SHCBP1Q8NEM2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SHCBP1Q8NEM2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SHCBP1Q8NEM2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SHCBP1Q8NEM2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.36■■□□□ 1.81
SHCBP1Q8NEM2 SERBP1P1-201ENST00000396021 1160 ntBASIC26.36■■□□□ 1.81
SHCBP1Q8NEM2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.36■■□□□ 1.81
SHCBP1Q8NEM2 MIR4767-201ENST00000582827 78 ntBASIC26.36■■□□□ 1.81
SHCBP1Q8NEM2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.36■■□□□ 1.81
SHCBP1Q8NEM2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SHCBP1Q8NEM2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SHCBP1Q8NEM2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.35■■□□□ 1.81
SHCBP1Q8NEM2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.35■■□□□ 1.81
SHCBP1Q8NEM2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.35■■□□□ 1.81
SHCBP1Q8NEM2 AL138724.1-201ENST00000606771 1088 ntBASIC26.35■■□□□ 1.81
SHCBP1Q8NEM2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.35■■□□□ 1.81
SHCBP1Q8NEM2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHCBP1Q8NEM2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHCBP1Q8NEM2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
SHCBP1Q8NEM2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SHCBP1Q8NEM2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SHCBP1Q8NEM2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.34■■□□□ 1.81
SHCBP1Q8NEM2 MIR5787-201ENST00000611784 55 ntBASIC26.34■■□□□ 1.81
SHCBP1Q8NEM2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
SHCBP1Q8NEM2 AL022069.1-201ENST00000568025 1636 ntBASIC26.33■■□□□ 1.81
SHCBP1Q8NEM2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SHCBP1Q8NEM2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
SHCBP1Q8NEM2 AC099791.2-201ENST00000605725 427 ntBASIC26.33■■□□□ 1.81
SHCBP1Q8NEM2 AC011298.3-201ENST00000615796 283 ntBASIC26.33■■□□□ 1.81
SHCBP1Q8NEM2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.33■■□□□ 1.81
SHCBP1Q8NEM2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.33■■□□□ 1.8
SHCBP1Q8NEM2 AC009102.2-201ENST00000606772 1639 ntBASIC26.32■■□□□ 1.8
SHCBP1Q8NEM2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SHCBP1Q8NEM2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
SHCBP1Q8NEM2 AL121749.1-202ENST00000609313 2153 ntBASIC26.32■■□□□ 1.8
SHCBP1Q8NEM2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.32■■□□□ 1.8
SHCBP1Q8NEM2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.32■■□□□ 1.8
SHCBP1Q8NEM2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SHCBP1Q8NEM2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.32■■□□□ 1.8
SHCBP1Q8NEM2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SHCBP1Q8NEM2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
SHCBP1Q8NEM2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SHCBP1Q8NEM2 AC092666.2-201ENST00000613287 246 ntBASIC26.31■■□□□ 1.8
SHCBP1Q8NEM2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
SHCBP1Q8NEM2 RASA4CP-201ENST00000424092 1398 ntBASIC26.31■■□□□ 1.8
SHCBP1Q8NEM2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.3■■□□□ 1.8
SHCBP1Q8NEM2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SHCBP1Q8NEM2 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.3■■□□□ 1.8
SHCBP1Q8NEM2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.3■■□□□ 1.8
SHCBP1Q8NEM2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
SHCBP1Q8NEM2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SHCBP1Q8NEM2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SHCBP1Q8NEM2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SHCBP1Q8NEM2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SHCBP1Q8NEM2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
SHCBP1Q8NEM2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SHCBP1Q8NEM2 CA15P2-201ENST00000611168 834 ntBASIC26.29■■□□□ 1.8
SHCBP1Q8NEM2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SHCBP1Q8NEM2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.29■■□□□ 1.8
SHCBP1Q8NEM2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SHCBP1Q8NEM2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SHCBP1Q8NEM2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.28■■□□□ 1.8
SHCBP1Q8NEM2 DUSP8P4-201ENST00000399538 1761 ntBASIC26.28■■□□□ 1.8
SHCBP1Q8NEM2 AC027682.1-201ENST00000562846 899 ntBASIC26.27■■□□□ 1.8
SHCBP1Q8NEM2 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.27■■□□□ 1.8
SHCBP1Q8NEM2 C17orf82-201ENST00000623772 1530 ntBASIC26.27■■□□□ 1.8
SHCBP1Q8NEM2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.27■■□□□ 1.8
SHCBP1Q8NEM2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SHCBP1Q8NEM2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SHCBP1Q8NEM2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.26■■□□□ 1.79
SHCBP1Q8NEM2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.26■■□□□ 1.79
SHCBP1Q8NEM2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.26■■□□□ 1.79
SHCBP1Q8NEM2 AC104564.3-201ENST00000582367 638 ntBASIC26.26■■□□□ 1.79
SHCBP1Q8NEM2 MIR6821-201ENST00000617625 74 ntBASIC26.26■■□□□ 1.79
SHCBP1Q8NEM2 AC241377.3-202ENST00000626088 1088 ntBASIC26.26■■□□□ 1.79
SHCBP1Q8NEM2 AC241585.3-202ENST00000628937 1088 ntBASIC26.26■■□□□ 1.79
SHCBP1Q8NEM2 AC245100.8-202ENST00000629247 1058 ntBASIC26.26■■□□□ 1.79
SHCBP1Q8NEM2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SHCBP1Q8NEM2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SHCBP1Q8NEM2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
SHCBP1Q8NEM2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.25■■□□□ 1.79
SHCBP1Q8NEM2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.25■■□□□ 1.79
SHCBP1Q8NEM2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SHCBP1Q8NEM2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.24■■□□□ 1.79
SHCBP1Q8NEM2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHCBP1Q8NEM2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.24■■□□□ 1.79
SHCBP1Q8NEM2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
SHCBP1Q8NEM2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SHCBP1Q8NEM2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SHCBP1Q8NEM2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.23■■□□□ 1.79
SHCBP1Q8NEM2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.23■■□□□ 1.79
SHCBP1Q8NEM2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms