Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NPAS4Q8IUM7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.94■■□□□ 1.58
NPAS4Q8IUM7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NPAS4Q8IUM7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.94■■□□□ 1.58
NPAS4Q8IUM7 AC091305.1-201ENST00000479476 895 ntBASIC24.94■■□□□ 1.58
NPAS4Q8IUM7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
NPAS4Q8IUM7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.93■■□□□ 1.58
NPAS4Q8IUM7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.93■■□□□ 1.58
NPAS4Q8IUM7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NPAS4Q8IUM7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NPAS4Q8IUM7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NPAS4Q8IUM7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
NPAS4Q8IUM7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.92■■□□□ 1.58
NPAS4Q8IUM7 MIR4767-201ENST00000582827 78 ntBASIC24.92■■□□□ 1.58
NPAS4Q8IUM7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NPAS4Q8IUM7 MIR5787-201ENST00000611784 55 ntBASIC24.92■■□□□ 1.58
NPAS4Q8IUM7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.92■■□□□ 1.58
NPAS4Q8IUM7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NPAS4Q8IUM7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.92■■□□□ 1.58
NPAS4Q8IUM7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NPAS4Q8IUM7 SLC6A10P-202ENST00000431994 2058 ntBASIC24.91■■□□□ 1.58
NPAS4Q8IUM7 SERBP1P1-201ENST00000396021 1160 ntBASIC24.91■■□□□ 1.58
NPAS4Q8IUM7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.91■■□□□ 1.58
NPAS4Q8IUM7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NPAS4Q8IUM7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
NPAS4Q8IUM7 AC092666.2-201ENST00000613287 246 ntBASIC24.91■■□□□ 1.58
NPAS4Q8IUM7 MIR6089-201ENST00000616698 64 ntBASIC24.91■■□□□ 1.58
NPAS4Q8IUM7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NPAS4Q8IUM7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.9■■□□□ 1.58
NPAS4Q8IUM7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
NPAS4Q8IUM7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.9■■□□□ 1.58
NPAS4Q8IUM7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
NPAS4Q8IUM7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.89■■□□□ 1.58
NPAS4Q8IUM7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
NPAS4Q8IUM7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.89■■□□□ 1.58
NPAS4Q8IUM7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.89■■□□□ 1.58
NPAS4Q8IUM7 AC099791.2-201ENST00000605725 427 ntBASIC24.89■■□□□ 1.58
NPAS4Q8IUM7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.89■■□□□ 1.57
NPAS4Q8IUM7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.89■■□□□ 1.57
NPAS4Q8IUM7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.88■■□□□ 1.57
NPAS4Q8IUM7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NPAS4Q8IUM7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
NPAS4Q8IUM7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NPAS4Q8IUM7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
NPAS4Q8IUM7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NPAS4Q8IUM7 AL022069.1-201ENST00000568025 1636 ntBASIC24.88■■□□□ 1.57
NPAS4Q8IUM7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NPAS4Q8IUM7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NPAS4Q8IUM7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.88■■□□□ 1.57
NPAS4Q8IUM7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
NPAS4Q8IUM7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NPAS4Q8IUM7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
NPAS4Q8IUM7 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.87■■□□□ 1.57
NPAS4Q8IUM7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.87■■□□□ 1.57
NPAS4Q8IUM7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
NPAS4Q8IUM7 AL138724.1-201ENST00000606771 1088 ntBASIC24.87■■□□□ 1.57
NPAS4Q8IUM7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
NPAS4Q8IUM7 AC009102.2-201ENST00000606772 1639 ntBASIC24.86■■□□□ 1.57
NPAS4Q8IUM7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
NPAS4Q8IUM7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NPAS4Q8IUM7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.86■■□□□ 1.57
NPAS4Q8IUM7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
NPAS4Q8IUM7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NPAS4Q8IUM7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.86■■□□□ 1.57
NPAS4Q8IUM7 AC011298.3-201ENST00000615796 283 ntBASIC24.86■■□□□ 1.57
NPAS4Q8IUM7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NPAS4Q8IUM7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
NPAS4Q8IUM7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.85■■□□□ 1.57
NPAS4Q8IUM7 RASA4CP-201ENST00000424092 1398 ntBASIC24.85■■□□□ 1.57
NPAS4Q8IUM7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.85■■□□□ 1.57
NPAS4Q8IUM7 CA15P2-201ENST00000611168 834 ntBASIC24.85■■□□□ 1.57
NPAS4Q8IUM7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
NPAS4Q8IUM7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.84■■□□□ 1.57
NPAS4Q8IUM7 AC027682.1-201ENST00000562846 899 ntBASIC24.84■■□□□ 1.57
NPAS4Q8IUM7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.84■■□□□ 1.57
NPAS4Q8IUM7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
NPAS4Q8IUM7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.84■■□□□ 1.57
NPAS4Q8IUM7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NPAS4Q8IUM7 DUSP8P4-201ENST00000399538 1761 ntBASIC24.83■■□□□ 1.57
NPAS4Q8IUM7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
NPAS4Q8IUM7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
NPAS4Q8IUM7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.83■■□□□ 1.57
NPAS4Q8IUM7 AC104564.3-201ENST00000582367 638 ntBASIC24.83■■□□□ 1.57
NPAS4Q8IUM7 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.83■■□□□ 1.57
NPAS4Q8IUM7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.83■■□□□ 1.57
NPAS4Q8IUM7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
NPAS4Q8IUM7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
NPAS4Q8IUM7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.82■■□□□ 1.56
NPAS4Q8IUM7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NPAS4Q8IUM7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NPAS4Q8IUM7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.82■■□□□ 1.56
NPAS4Q8IUM7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NPAS4Q8IUM7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NPAS4Q8IUM7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.81■■□□□ 1.56
NPAS4Q8IUM7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NPAS4Q8IUM7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.81■■□□□ 1.56
NPAS4Q8IUM7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.81■■□□□ 1.56
NPAS4Q8IUM7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NPAS4Q8IUM7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.8■■□□□ 1.56
NPAS4Q8IUM7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms