Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.37□□□□□ -0.11
VPS13BQ7Z7G8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.37□□□□□ -0.11
VPS13BQ7Z7G8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13BQ7Z7G8 YBX1P1-201ENST00000445822 960 ntBASIC14.36□□□□□ -0.11
VPS13BQ7Z7G8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13BQ7Z7G8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13BQ7Z7G8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VPS13BQ7Z7G8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
VPS13BQ7Z7G8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.36□□□□□ -0.11
VPS13BQ7Z7G8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13BQ7Z7G8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VPS13BQ7Z7G8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13BQ7Z7G8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
VPS13BQ7Z7G8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC14.36□□□□□ -0.11
VPS13BQ7Z7G8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13BQ7Z7G8 AC097639.1-201ENST00000565519 1891 ntBASIC14.35□□□□□ -0.11
VPS13BQ7Z7G8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13BQ7Z7G8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13BQ7Z7G8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS13BQ7Z7G8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS13BQ7Z7G8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13BQ7Z7G8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
VPS13BQ7Z7G8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS13BQ7Z7G8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.35□□□□□ -0.11
VPS13BQ7Z7G8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.35□□□□□ -0.11
VPS13BQ7Z7G8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.35□□□□□ -0.11
VPS13BQ7Z7G8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13BQ7Z7G8 AL121749.1-202ENST00000609313 2153 ntBASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 ESRRAP2-201ENST00000418437 1549 ntBASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 AC004448.1-201ENST00000458332 883 ntBASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VPS13BQ7Z7G8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC14.33□□□□□ -0.11
VPS13BQ7Z7G8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
VPS13BQ7Z7G8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VPS13BQ7Z7G8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
VPS13BQ7Z7G8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.11
VPS13BQ7Z7G8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13BQ7Z7G8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS13BQ7Z7G8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS13BQ7Z7G8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13BQ7Z7G8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.33□□□□□ -0.12
VPS13BQ7Z7G8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13BQ7Z7G8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS13BQ7Z7G8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13BQ7Z7G8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13BQ7Z7G8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC14.33□□□□□ -0.12
VPS13BQ7Z7G8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.33□□□□□ -0.12
VPS13BQ7Z7G8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13BQ7Z7G8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.33□□□□□ -0.12
VPS13BQ7Z7G8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.33□□□□□ -0.12
VPS13BQ7Z7G8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.33□□□□□ -0.12
VPS13BQ7Z7G8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 AC123595.1-201ENST00000440769 1046 ntBASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 DUX4L19-201ENST00000557448 1267 ntBASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC14.32□□□□□ -0.12
VPS13BQ7Z7G8 AL138724.1-201ENST00000606771 1088 ntBASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 AC233992.3-201ENST00000607491 485 ntBASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13BQ7Z7G8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms