Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS13CQ709C8 AC004448.1-201ENST00000458332 883 ntBASIC19.41■□□□□ 0.7
VPS13CQ709C8 DUX4L19-201ENST00000557448 1267 ntBASIC19.41■□□□□ 0.7
VPS13CQ709C8 KRT18P5-201ENST00000436075 1291 ntBASIC19.4■□□□□ 0.7
VPS13CQ709C8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VPS13CQ709C8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS13CQ709C8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS13CQ709C8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VPS13CQ709C8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.39■□□□□ 0.7
VPS13CQ709C8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.39■□□□□ 0.7
VPS13CQ709C8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.7
VPS13CQ709C8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VPS13CQ709C8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS13CQ709C8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VPS13CQ709C8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS13CQ709C8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.39■□□□□ 0.69
VPS13CQ709C8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.39■□□□□ 0.69
VPS13CQ709C8 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.39■□□□□ 0.69
VPS13CQ709C8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
VPS13CQ709C8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.39■□□□□ 0.69
VPS13CQ709C8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.38■□□□□ 0.69
VPS13CQ709C8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VPS13CQ709C8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.38■□□□□ 0.69
VPS13CQ709C8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.38■□□□□ 0.69
VPS13CQ709C8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS13CQ709C8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS13CQ709C8 AC233992.3-201ENST00000607491 485 ntBASIC19.38■□□□□ 0.69
VPS13CQ709C8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VPS13CQ709C8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS13CQ709C8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS13CQ709C8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS13CQ709C8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS13CQ709C8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS13CQ709C8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VPS13CQ709C8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.37■□□□□ 0.69
VPS13CQ709C8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS13CQ709C8 HLA-L-209ENST00000420110 1011 ntBASIC19.37■□□□□ 0.69
VPS13CQ709C8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS13CQ709C8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VPS13CQ709C8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.37■□□□□ 0.69
VPS13CQ709C8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS13CQ709C8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS13CQ709C8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS13CQ709C8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS13CQ709C8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS13CQ709C8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS13CQ709C8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS13CQ709C8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS13CQ709C8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.36■□□□□ 0.69
VPS13CQ709C8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
VPS13CQ709C8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VPS13CQ709C8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS13CQ709C8 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.36■□□□□ 0.69
VPS13CQ709C8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS13CQ709C8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS13CQ709C8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
VPS13CQ709C8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS13CQ709C8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS13CQ709C8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS13CQ709C8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS13CQ709C8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS13CQ709C8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS13CQ709C8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS13CQ709C8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS13CQ709C8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS13CQ709C8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS13CQ709C8 AC099791.1-201ENST00000416440 715 ntBASIC19.34■□□□□ 0.69
VPS13CQ709C8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
VPS13CQ709C8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS13CQ709C8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS13CQ709C8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.34■□□□□ 0.69
VPS13CQ709C8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS13CQ709C8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS13CQ709C8 DUX4L2-201ENST00000561772 1275 ntBASIC19.34■□□□□ 0.69
VPS13CQ709C8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.34■□□□□ 0.69
VPS13CQ709C8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
VPS13CQ709C8 DUX4L6-201ENST00000626483 1275 ntBASIC19.34■□□□□ 0.69
VPS13CQ709C8 DUX4L1-201ENST00000627662 1275 ntBASIC19.34■□□□□ 0.69
VPS13CQ709C8 DUX4L8-201ENST00000629013 1275 ntBASIC19.34■□□□□ 0.69
VPS13CQ709C8 DUX4L3-201ENST00000630187 1275 ntBASIC19.34■□□□□ 0.69
VPS13CQ709C8 DUX4L7-201ENST00000630678 1275 ntBASIC19.34■□□□□ 0.69
VPS13CQ709C8 DUX4L5-201ENST00000630834 1275 ntBASIC19.34■□□□□ 0.69
VPS13CQ709C8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS13CQ709C8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
VPS13CQ709C8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS13CQ709C8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.33■□□□□ 0.68
VPS13CQ709C8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
VPS13CQ709C8 ESRRAP2-201ENST00000418437 1549 ntBASIC19.33■□□□□ 0.68
VPS13CQ709C8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
VPS13CQ709C8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VPS13CQ709C8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.33■□□□□ 0.68
VPS13CQ709C8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.33■□□□□ 0.68
VPS13CQ709C8 AC011298.3-201ENST00000615796 283 ntBASIC19.33■□□□□ 0.68
VPS13CQ709C8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS13CQ709C8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VPS13CQ709C8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VPS13CQ709C8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
VPS13CQ709C8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VPS13CQ709C8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VPS13CQ709C8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms