Protein–RNA interactions for Protein: Q5VWM6

PRAMEF13, Putative PRAME family member 13, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13Q5VWM6 AC239859.2-201ENST00000444165 318 ntBASIC22.25■■□□□ 1.15
PRAMEF13Q5VWM6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.25■■□□□ 1.15
PRAMEF13Q5VWM6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.25■■□□□ 1.15
PRAMEF13Q5VWM6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PRAMEF13Q5VWM6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PRAMEF13Q5VWM6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PRAMEF13Q5VWM6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PRAMEF13Q5VWM6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PRAMEF13Q5VWM6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PRAMEF13Q5VWM6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PRAMEF13Q5VWM6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PRAMEF13Q5VWM6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PRAMEF13Q5VWM6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PRAMEF13Q5VWM6 Z92544.1-202ENST00000571933 1220 ntBASIC22.24■■□□□ 1.15
PRAMEF13Q5VWM6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PRAMEF13Q5VWM6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PRAMEF13Q5VWM6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PRAMEF13Q5VWM6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PRAMEF13Q5VWM6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PRAMEF13Q5VWM6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PRAMEF13Q5VWM6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PRAMEF13Q5VWM6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PRAMEF13Q5VWM6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PRAMEF13Q5VWM6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.22■■□□□ 1.15
PRAMEF13Q5VWM6 AC004812.2-201ENST00000611079 2094 ntBASIC22.22■■□□□ 1.15
PRAMEF13Q5VWM6 AC021242.3-201ENST00000607598 1377 ntBASIC22.22■■□□□ 1.15
PRAMEF13Q5VWM6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
PRAMEF13Q5VWM6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PRAMEF13Q5VWM6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PRAMEF13Q5VWM6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.21■■□□□ 1.15
PRAMEF13Q5VWM6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PRAMEF13Q5VWM6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PRAMEF13Q5VWM6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.21■■□□□ 1.15
PRAMEF13Q5VWM6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.21■■□□□ 1.15
PRAMEF13Q5VWM6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.21■■□□□ 1.15
PRAMEF13Q5VWM6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PRAMEF13Q5VWM6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
PRAMEF13Q5VWM6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PRAMEF13Q5VWM6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.2■■□□□ 1.14
PRAMEF13Q5VWM6 KRT125P-201ENST00000546827 989 ntBASIC22.2■■□□□ 1.14
PRAMEF13Q5VWM6 AC131212.1-201ENST00000613771 668 ntBASIC22.2■■□□□ 1.14
PRAMEF13Q5VWM6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.2■■□□□ 1.14
PRAMEF13Q5VWM6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PRAMEF13Q5VWM6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.2■■□□□ 1.14
PRAMEF13Q5VWM6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.2■■□□□ 1.14
PRAMEF13Q5VWM6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
PRAMEF13Q5VWM6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PRAMEF13Q5VWM6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.19■■□□□ 1.14
PRAMEF13Q5VWM6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.19■■□□□ 1.14
PRAMEF13Q5VWM6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PRAMEF13Q5VWM6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.19■■□□□ 1.14
PRAMEF13Q5VWM6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PRAMEF13Q5VWM6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PRAMEF13Q5VWM6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PRAMEF13Q5VWM6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PRAMEF13Q5VWM6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PRAMEF13Q5VWM6 AC004448.1-201ENST00000458332 883 ntBASIC22.18■■□□□ 1.14
PRAMEF13Q5VWM6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.18■■□□□ 1.14
PRAMEF13Q5VWM6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.18■■□□□ 1.14
PRAMEF13Q5VWM6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PRAMEF13Q5VWM6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PRAMEF13Q5VWM6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.17■■□□□ 1.14
PRAMEF13Q5VWM6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.17■■□□□ 1.14
PRAMEF13Q5VWM6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PRAMEF13Q5VWM6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PRAMEF13Q5VWM6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PRAMEF13Q5VWM6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PRAMEF13Q5VWM6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.16■■□□□ 1.14
PRAMEF13Q5VWM6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PRAMEF13Q5VWM6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PRAMEF13Q5VWM6 AL356441.2-201ENST00000443009 864 ntBASIC22.16■■□□□ 1.14
PRAMEF13Q5VWM6 SNX5-217ENST00000606557 1087 ntBASIC22.16■■□□□ 1.14
PRAMEF13Q5VWM6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PRAMEF13Q5VWM6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PRAMEF13Q5VWM6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.15■■□□□ 1.14
PRAMEF13Q5VWM6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PRAMEF13Q5VWM6 MIR4787-201ENST00000607364 84 ntBASIC22.15■■□□□ 1.14
PRAMEF13Q5VWM6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PRAMEF13Q5VWM6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PRAMEF13Q5VWM6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PRAMEF13Q5VWM6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
PRAMEF13Q5VWM6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms