Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.67■■□□□ 1.86
COL13A1Q5TAT6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
COL13A1Q5TAT6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL13A1Q5TAT6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL13A1Q5TAT6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC26.67■■□□□ 1.86
COL13A1Q5TAT6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.67■■□□□ 1.86
COL13A1Q5TAT6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL13A1Q5TAT6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL13A1Q5TAT6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL13A1Q5TAT6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL13A1Q5TAT6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
COL13A1Q5TAT6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.66■■□□□ 1.86
COL13A1Q5TAT6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL13A1Q5TAT6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.66■■□□□ 1.86
COL13A1Q5TAT6 KRT18P61-201ENST00000585825 1298 ntBASIC26.66■■□□□ 1.86
COL13A1Q5TAT6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL13A1Q5TAT6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.66■■□□□ 1.86
COL13A1Q5TAT6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL13A1Q5TAT6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL13A1Q5TAT6 TPRG1LP1-201ENST00000598702 760 ntBASIC26.65■■□□□ 1.86
COL13A1Q5TAT6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26.65■■□□□ 1.86
COL13A1Q5TAT6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.65■■□□□ 1.86
COL13A1Q5TAT6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL13A1Q5TAT6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL13A1Q5TAT6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.65■■□□□ 1.86
COL13A1Q5TAT6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL13A1Q5TAT6 AC005703.6-201ENST00000623265 1329 ntBASIC26.65■■□□□ 1.86
COL13A1Q5TAT6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL13A1Q5TAT6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC26.64■■□□□ 1.86
COL13A1Q5TAT6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.64■■□□□ 1.86
COL13A1Q5TAT6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.64■■□□□ 1.86
COL13A1Q5TAT6 AL354811.1-201ENST00000610286 706 ntBASIC26.64■■□□□ 1.86
COL13A1Q5TAT6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL13A1Q5TAT6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.64■■□□□ 1.86
COL13A1Q5TAT6 ITM2C-210ENST00000620962 501 ntBASIC26.64■■□□□ 1.86
COL13A1Q5TAT6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
COL13A1Q5TAT6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
COL13A1Q5TAT6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL13A1Q5TAT6 KRT18P29-201ENST00000397031 1267 ntBASIC26.63■■□□□ 1.85
COL13A1Q5TAT6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.63■■□□□ 1.85
COL13A1Q5TAT6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.63■■□□□ 1.85
COL13A1Q5TAT6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.63■■□□□ 1.85
COL13A1Q5TAT6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL13A1Q5TAT6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL13A1Q5TAT6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL13A1Q5TAT6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL13A1Q5TAT6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
COL13A1Q5TAT6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL13A1Q5TAT6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL13A1Q5TAT6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.62■■□□□ 1.85
COL13A1Q5TAT6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL13A1Q5TAT6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.62■■□□□ 1.85
COL13A1Q5TAT6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL13A1Q5TAT6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.62■■□□□ 1.85
COL13A1Q5TAT6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC26.62■■□□□ 1.85
COL13A1Q5TAT6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.62■■□□□ 1.85
COL13A1Q5TAT6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL13A1Q5TAT6 AP004607.4-201ENST00000530158 1459 ntBASIC26.62■■□□□ 1.85
COL13A1Q5TAT6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL13A1Q5TAT6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.61■■□□□ 1.85
COL13A1Q5TAT6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
COL13A1Q5TAT6 PRORSD1P-201ENST00000295112 541 ntBASIC26.61■■□□□ 1.85
COL13A1Q5TAT6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
COL13A1Q5TAT6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.61■■□□□ 1.85
COL13A1Q5TAT6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.61■■□□□ 1.85
COL13A1Q5TAT6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.61■■□□□ 1.85
COL13A1Q5TAT6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.61■■□□□ 1.85
COL13A1Q5TAT6 AP006294.2-201ENST00000641667 209 ntBASIC26.61■■□□□ 1.85
COL13A1Q5TAT6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.6■■□□□ 1.85
COL13A1Q5TAT6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL13A1Q5TAT6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.6■■□□□ 1.85
COL13A1Q5TAT6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL13A1Q5TAT6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC26.6■■□□□ 1.85
COL13A1Q5TAT6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL13A1Q5TAT6 MIR572-201ENST00000384983 95 ntBASIC26.59■■□□□ 1.85
COL13A1Q5TAT6 AC069152.1-201ENST00000438030 544 ntBASIC26.59■■□□□ 1.85
COL13A1Q5TAT6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC26.59■■□□□ 1.85
COL13A1Q5TAT6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.59■■□□□ 1.85
COL13A1Q5TAT6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
COL13A1Q5TAT6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.58■■□□□ 1.85
COL13A1Q5TAT6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
COL13A1Q5TAT6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL13A1Q5TAT6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL13A1Q5TAT6 POU5F1P3-201ENST00000428824 1078 ntBASIC26.58■■□□□ 1.85
COL13A1Q5TAT6 DBI-210ENST00000542275 757 ntTSL 5 BASIC26.58■■□□□ 1.85
COL13A1Q5TAT6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC26.58■■□□□ 1.85
COL13A1Q5TAT6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
COL13A1Q5TAT6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.58■■□□□ 1.85
COL13A1Q5TAT6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
COL13A1Q5TAT6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.57■■□□□ 1.84
COL13A1Q5TAT6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL13A1Q5TAT6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL13A1Q5TAT6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.56■■□□□ 1.84
COL13A1Q5TAT6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
COL13A1Q5TAT6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL13A1Q5TAT6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL13A1Q5TAT6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL13A1Q5TAT6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL13A1Q5TAT6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL13A1Q5TAT6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms