Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBR4Q5T4S7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.97□□□□□ -0.33
UBR4Q5T4S7 AP004833.2-201ENST00000532228 1454 ntBASIC12.97□□□□□ -0.33
UBR4Q5T4S7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 AL445228.2-201ENST00000605589 952 ntBASIC12.96□□□□□ -0.33
UBR4Q5T4S7 AL135925.1-201ENST00000605920 1701 ntBASIC12.96□□□□□ -0.33
UBR4Q5T4S7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBR4Q5T4S7 MIR663A-201ENST00000385250 93 ntBASIC12.96□□□□□ -0.34
UBR4Q5T4S7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.96□□□□□ -0.34
UBR4Q5T4S7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UBR4Q5T4S7 MIR6084-201ENST00000622012 110 ntBASIC12.96□□□□□ -0.34
UBR4Q5T4S7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 GCSHP5-201ENST00000443090 522 ntBASIC12.95□□□□□ -0.34
UBR4Q5T4S7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 MPST-208ENST00000628507 698 ntTSL 5 BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 AC211429.1-201ENST00000415277 523 ntBASIC12.94□□□□□ -0.34
UBR4Q5T4S7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 AP005435.1-201ENST00000529293 1178 ntBASIC12.93□□□□□ -0.34
UBR4Q5T4S7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 SLC7A5P2-201ENST00000553010 536 ntBASIC12.91□□□□□ -0.34
UBR4Q5T4S7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 DUSP5P2-201ENST00000426873 1033 ntBASIC12.91□□□□□ -0.34
UBR4Q5T4S7 AC099791.2-201ENST00000605725 427 ntBASIC12.91□□□□□ -0.34
UBR4Q5T4S7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 KRT18P10-201ENST00000388836 1287 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms