Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN20P56880 BX664725.1-201ENST00000438252 379 ntBASIC21.02■□□□□ 0.96
CLDN20P56880 AC137630.3-201ENST00000607245 391 ntBASIC21.02■□□□□ 0.96
CLDN20P56880 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.02■□□□□ 0.96
CLDN20P56880 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.02■□□□□ 0.96
CLDN20P56880 AC138932.3-201ENST00000567634 1902 ntBASIC21.02■□□□□ 0.95
CLDN20P56880 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN20P56880 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN20P56880 Z92544.1-202ENST00000571933 1220 ntBASIC21.01■□□□□ 0.95
CLDN20P56880 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN20P56880 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN20P56880 AC022211.4-201ENST00000625094 2161 ntBASIC21■□□□□ 0.95
CLDN20P56880 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN20P56880 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN20P56880 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLDN20P56880 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21■□□□□ 0.95
CLDN20P56880 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21■□□□□ 0.95
CLDN20P56880 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21■□□□□ 0.95
CLDN20P56880 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN20P56880 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN20P56880 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN20P56880 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
CLDN20P56880 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN20P56880 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN20P56880 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN20P56880 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.99■□□□□ 0.95
CLDN20P56880 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN20P56880 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CLDN20P56880 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN20P56880 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN20P56880 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN20P56880 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLDN20P56880 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN20P56880 KRT125P-201ENST00000546827 989 ntBASIC20.98■□□□□ 0.95
CLDN20P56880 MIR6089-201ENST00000616698 64 ntBASIC20.98■□□□□ 0.95
CLDN20P56880 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN20P56880 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CLDN20P56880 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN20P56880 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN20P56880 AF131216.4-201ENST00000638924 1588 ntBASIC20.97■□□□□ 0.95
CLDN20P56880 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN20P56880 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN20P56880 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.96■□□□□ 0.95
CLDN20P56880 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN20P56880 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN20P56880 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN20P56880 GUSBP5-201ENST00000418136 578 ntBASIC20.96■□□□□ 0.95
CLDN20P56880 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.96■□□□□ 0.95
CLDN20P56880 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.96■□□□□ 0.95
CLDN20P56880 MIR4787-201ENST00000607364 84 ntBASIC20.96■□□□□ 0.95
CLDN20P56880 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.96■□□□□ 0.95
CLDN20P56880 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN20P56880 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN20P56880 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN20P56880 AC021242.3-201ENST00000607598 1377 ntBASIC20.96■□□□□ 0.95
CLDN20P56880 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CLDN20P56880 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN20P56880 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN20P56880 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.95■□□□□ 0.94
CLDN20P56880 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN20P56880 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN20P56880 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN20P56880 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN20P56880 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CLDN20P56880 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN20P56880 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN20P56880 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN20P56880 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.94■□□□□ 0.94
CLDN20P56880 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN20P56880 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.94■□□□□ 0.94
CLDN20P56880 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CLDN20P56880 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN20P56880 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CLDN20P56880 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN20P56880 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN20P56880 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN20P56880 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN20P56880 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN20P56880 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN20P56880 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.93■□□□□ 0.94
CLDN20P56880 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN20P56880 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN20P56880 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN20P56880 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN20P56880 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN20P56880 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.92■□□□□ 0.94
CLDN20P56880 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CLDN20P56880 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN20P56880 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN20P56880 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN20P56880 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN20P56880 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.91■□□□□ 0.94
CLDN20P56880 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.91■□□□□ 0.94
CLDN20P56880 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN20P56880 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.91■□□□□ 0.94
CLDN20P56880 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.91■□□□□ 0.94
CLDN20P56880 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN20P56880 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.91■□□□□ 0.94
CLDN20P56880 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CLDN20P56880 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms