Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 AIM17YHL021C 1398 nt5.04□□□□□ -1.6
YNL040WP53960 YEL067CYEL067C 588 nt5.04□□□□□ -1.6
YNL040WP53960 RMR1YGL250W 726 nt5.04□□□□□ -1.6
YNL040WP53960 TRS33YOR115C 807 nt5.04□□□□□ -1.6
YNL040WP53960 CLF1YLR117C 2064 nt5.04□□□□□ -1.6
YNL040WP53960 GCN20YFR009W 2259 nt5.04□□□□□ -1.6
YNL040WP53960 SKG3YLR187W 3081 nt5.03□□□□□ -1.6
YNL040WP53960 ASA1YPR085C 1332 nt5.03□□□□□ -1.6
YNL040WP53960 PHM8YER037W 966 nt5.03□□□□□ -1.6
YNL040WP53960 LCP5YER127W 1074 nt5.03□□□□□ -1.6
YNL040WP53960 GRX4YER174C 735 nt5.03□□□□□ -1.6
YNL040WP53960 YNG2YHR090C 849 nt5.03□□□□□ -1.6
YNL040WP53960 REC114YMR133W 1287 nt5.03□□□□□ -1.6
YNL040WP53960 YNL174WYNL174W 573 nt5.03□□□□□ -1.6
YNL040WP53960 UBA2YDR390C 1911 nt5.03□□□□□ -1.6
YNL040WP53960 UTP9YHR196W 1728 nt5.03□□□□□ -1.6
YNL040WP53960 YPL245WYPL245W 1365 nt5.03□□□□□ -1.6
YNL040WP53960 DRN1YGR093W 1524 nt5.02□□□□□ -1.61
YNL040WP53960 YMR102CYMR102C 2505 nt5.02□□□□□ -1.61
YNL040WP53960 YJL211CYJL211C 444 nt5.02□□□□□ -1.61
YNL040WP53960 PEX22YAL055W 543 nt5.02□□□□□ -1.61
YNL040WP53960 PGM2YMR105C 1710 nt5.01□□□□□ -1.61
YNL040WP53960 BUD22YMR014W 1560 nt5.01□□□□□ -1.61
YNL040WP53960 YTA6YPL074W 2265 nt5.01□□□□□ -1.61
YNL040WP53960 YCR075W-AYCR075W-A 228 nt5.01□□□□□ -1.61
YNL040WP53960 SOH1YGL127C 384 nt5.01□□□□□ -1.61
YNL040WP53960 YMR010WYMR010W 1218 nt5.01□□□□□ -1.61
YNL040WP53960 NHP6AYPR052C 282 nt5.01□□□□□ -1.61
YNL040WP53960 NOC4YPR144C 1659 nt5.01□□□□□ -1.61
YNL040WP53960 COT1YOR316C 1320 nt5□□□□□ -1.61
YNL040WP53960 NOP16YER002W 696 nt5□□□□□ -1.61
YNL040WP53960 VID30YGL227W 2877 nt5□□□□□ -1.61
YNL040WP53960 PRO2YOR323C 1371 nt5□□□□□ -1.61
YNL040WP53960 YAP1802YGR241C 1707 nt5□□□□□ -1.61
YNL040WP53960 DNF2YDR093W 4839 nt4.99□□□□□ -1.61
YNL040WP53960 PEX29YDR479C 1665 nt4.99□□□□□ -1.61
YNL040WP53960 YDR396WYDR396W 501 nt4.99□□□□□ -1.61
YNL040WP53960 ARO2YGL148W 1131 nt4.99□□□□□ -1.61
YNL040WP53960 RHO3YIL118W 696 nt4.99□□□□□ -1.61
YNL040WP53960 YKL023WYKL023W 834 nt4.99□□□□□ -1.61
YNL040WP53960 ADE6YGR061C 4077 nt4.99□□□□□ -1.61
YNL040WP53960 FAP1YNL023C 2898 nt4.98□□□□□ -1.61
YNL040WP53960 ECM7YLR443W 1347 nt4.98□□□□□ -1.61
YNL040WP53960 AIR2YDL175C 1035 nt4.98□□□□□ -1.61
YNL040WP53960 YER084WYER084W 387 nt4.98□□□□□ -1.61
YNL040WP53960 YGL185CYGL185C 1140 nt4.98□□□□□ -1.61
YNL040WP53960 YHR212W-AYHR212W-A 204 nt4.98□□□□□ -1.61
YNL040WP53960 YJR085CYJR085C 318 nt4.98□□□□□ -1.61
YNL040WP53960 DOA1YKL213C 2148 nt4.98□□□□□ -1.61
YNL040WP53960 YAR061WYAR061W 204 nt4.98□□□□□ -1.61
YNL040WP53960 ATG17YLR423C 1254 nt4.98□□□□□ -1.61
YNL040WP53960 YPL199CYPL199C 723 nt4.98□□□□□ -1.61
YNL040WP53960 HRR25YPL204W 1485 nt4.98□□□□□ -1.61
YNL040WP53960 STE20YHL007C 2820 nt4.98□□□□□ -1.61
YNL040WP53960 NUP1YOR098C 3231 nt4.98□□□□□ -1.61
YNL040WP53960 NPL6YMR091C 1308 nt4.97□□□□□ -1.61
YNL040WP53960 NGL2YMR285C 1548 nt4.97□□□□□ -1.61
YNL040WP53960 MKC7YDR144C 1791 nt4.97□□□□□ -1.61
YNL040WP53960 NOP8YOL144W 1455 nt4.97□□□□□ -1.61
YNL040WP53960 YFR035CYFR035C 345 nt4.97□□□□□ -1.61
YNL040WP53960 YJU2YKL095W 837 nt4.97□□□□□ -1.61
YNL040WP53960 ECM15YBL001C 315 nt4.97□□□□□ -1.61
YNL040WP53960 YNL296WYNL296W 315 nt4.97□□□□□ -1.61
YNL040WP53960 MAP2YBL091C 1266 nt4.97□□□□□ -1.61
YNL040WP53960 RAD53YPL153C 2466 nt4.96□□□□□ -1.62
YNL040WP53960 YEL053W-AYEL053W-A 348 nt4.96□□□□□ -1.62
YNL040WP53960 NPY1YGL067W 1155 nt4.96□□□□□ -1.62
YNL040WP53960 YGR153WYGR153W 654 nt4.96□□□□□ -1.62
YNL040WP53960 VPS29YHR012W 849 nt4.96□□□□□ -1.62
YNL040WP53960 TEF4YKL081W 1239 nt4.96□□□□□ -1.62
YNL040WP53960 YKR073CYKR073C 321 nt4.96□□□□□ -1.62
YNL040WP53960 YNL108CYNL108C 813 nt4.96□□□□□ -1.62
YNL040WP53960 SLD7YOR060C 774 nt4.96□□□□□ -1.62
YNL040WP53960 VID22YLR373C 2706 nt4.96□□□□□ -1.62
YNL040WP53960 NOP7YGR103W 1818 nt4.95□□□□□ -1.62
YNL040WP53960 YFR034W-AYFR034W-A 288 nt4.95□□□□□ -1.62
YNL040WP53960 HLJ1YMR161W 675 nt4.95□□□□□ -1.62
YNL040WP53960 COG5YNL051W 1212 nt4.95□□□□□ -1.62
YNL040WP53960 FEX1YOR390W 1128 nt4.95□□□□□ -1.62
YNL040WP53960 FEX2YPL279C 1128 nt4.95□□□□□ -1.62
YNL040WP53960 HOS1YPR068C 1413 nt4.95□□□□□ -1.62
YNL040WP53960 IMD3YLR432W 1572 nt4.95□□□□□ -1.62
YNL040WP53960 MPS3YJL019W 2049 nt4.94□□□□□ -1.62
YNL040WP53960 ATG23YLR431C 1362 nt4.94□□□□□ -1.62
YNL040WP53960 VAM7YGL212W 951 nt4.94□□□□□ -1.62
YNL040WP53960 SKG1YKR100C 1068 nt4.94□□□□□ -1.62
YNL040WP53960 GUS1YGL245W 2127 nt4.94□□□□□ -1.62
YNL040WP53960 ZRT1YGL255W 1131 nt4.93□□□□□ -1.62
YNL040WP53960 PUT1YLR142W 1431 nt4.93□□□□□ -1.62
YNL040WP53960 DOM34YNL001W 1161 nt4.93□□□□□ -1.62
YNL040WP53960 FRS1YLR060W 1788 nt4.93□□□□□ -1.62
YNL040WP53960 RVB1YDR190C 1392 nt4.92□□□□□ -1.62
YNL040WP53960 CLA4YNL298W 2529 nt4.92□□□□□ -1.62
YNL040WP53960 IMA1YGR287C 1770 nt4.92□□□□□ -1.62
YNL040WP53960 LHP1YDL051W 828 nt4.92□□□□□ -1.62
YNL040WP53960 CTR2YHR175W 570 nt4.92□□□□□ -1.62
YNL040WP53960 ATG33YLR356W 594 nt4.92□□□□□ -1.62
YNL040WP53960 YBR016WYBR016W 387 nt4.92□□□□□ -1.62
YNL040WP53960 ENV9YOR246C 993 nt4.92□□□□□ -1.62
YNL040WP53960 PDB1YBR221C 1101 nt4.92□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms