Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LHX2P50458 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LHX2P50458 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LHX2P50458 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.67■□□□□ 0.9
LHX2P50458 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.67■□□□□ 0.9
LHX2P50458 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.67■□□□□ 0.9
LHX2P50458 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.67■□□□□ 0.9
LHX2P50458 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.67■□□□□ 0.9
LHX2P50458 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LHX2P50458 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.67■□□□□ 0.9
LHX2P50458 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LHX2P50458 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LHX2P50458 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.67■□□□□ 0.9
LHX2P50458 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LHX2P50458 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LHX2P50458 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.66■□□□□ 0.9
LHX2P50458 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.66■□□□□ 0.9
LHX2P50458 AC008406.3-201ENST00000620001 1374 ntBASIC20.66■□□□□ 0.9
LHX2P50458 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
LHX2P50458 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.66■□□□□ 0.9
LHX2P50458 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LHX2P50458 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LHX2P50458 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX2P50458 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX2P50458 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX2P50458 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX2P50458 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX2P50458 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX2P50458 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LHX2P50458 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.65■□□□□ 0.9
LHX2P50458 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LHX2P50458 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.65■□□□□ 0.9
LHX2P50458 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX2P50458 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX2P50458 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
LHX2P50458 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LHX2P50458 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX2P50458 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.64■□□□□ 0.89
LHX2P50458 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LHX2P50458 AC131281.2-201ENST00000520478 145 ntBASIC20.64■□□□□ 0.89
LHX2P50458 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
LHX2P50458 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX2P50458 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LHX2P50458 AL161729.1-201ENST00000604104 1402 ntBASIC20.63■□□□□ 0.89
LHX2P50458 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.63■□□□□ 0.89
LHX2P50458 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.63■□□□□ 0.89
LHX2P50458 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LHX2P50458 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LHX2P50458 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LHX2P50458 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.63■□□□□ 0.89
LHX2P50458 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LHX2P50458 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.63■□□□□ 0.89
LHX2P50458 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.62■□□□□ 0.89
LHX2P50458 AC005703.6-201ENST00000623265 1329 ntBASIC20.62■□□□□ 0.89
LHX2P50458 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LHX2P50458 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LHX2P50458 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LHX2P50458 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LHX2P50458 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LHX2P50458 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LHX2P50458 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LHX2P50458 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
LHX2P50458 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LHX2P50458 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
LHX2P50458 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LHX2P50458 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.61■□□□□ 0.89
LHX2P50458 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.61■□□□□ 0.89
LHX2P50458 AL512631.2-201ENST00000604634 923 ntBASIC20.61■□□□□ 0.89
LHX2P50458 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.61■□□□□ 0.89
LHX2P50458 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LHX2P50458 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LHX2P50458 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.6■□□□□ 0.89
LHX2P50458 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LHX2P50458 AC135731.1-201ENST00000569415 2548 ntBASIC20.6■□□□□ 0.89
LHX2P50458 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LHX2P50458 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LHX2P50458 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.6■□□□□ 0.89
LHX2P50458 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.6■□□□□ 0.89
LHX2P50458 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.6■□□□□ 0.89
LHX2P50458 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.6■□□□□ 0.89
LHX2P50458 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.6■□□□□ 0.89
LHX2P50458 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LHX2P50458 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LHX2P50458 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LHX2P50458 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.59■□□□□ 0.89
LHX2P50458 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LHX2P50458 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LHX2P50458 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
LHX2P50458 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LHX2P50458 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LHX2P50458 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LHX2P50458 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.59■□□□□ 0.89
LHX2P50458 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.59■□□□□ 0.89
LHX2P50458 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LHX2P50458 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LHX2P50458 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LHX2P50458 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.59■□□□□ 0.89
LHX2P50458 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LHX2P50458 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LHX2P50458 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms