Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC35■■■■□ 3.19
KDM5CP41229 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC35■■■■□ 3.19
KDM5CP41229 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC35■■■■□ 3.19
KDM5CP41229 AC097639.1-201ENST00000565519 1891 ntBASIC35■■■■□ 3.19
KDM5CP41229 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC35■■■■□ 3.19
KDM5CP41229 KRT18P5-201ENST00000436075 1291 ntBASIC35■■■■□ 3.19
KDM5CP41229 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC35■■■■□ 3.19
KDM5CP41229 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC34.99■■■■□ 3.19
KDM5CP41229 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
KDM5CP41229 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
KDM5CP41229 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC34.98■■■■□ 3.19
KDM5CP41229 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC34.98■■■■□ 3.19
KDM5CP41229 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
KDM5CP41229 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
KDM5CP41229 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC34.97■■■■□ 3.19
KDM5CP41229 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
KDM5CP41229 ASB1-202ENST00000409297 878 ntTSL 5 BASIC34.97■■■■□ 3.19
KDM5CP41229 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC34.97■■■■□ 3.19
KDM5CP41229 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
KDM5CP41229 AC034268.1-201ENST00000441047 882 ntBASIC34.96■■■■□ 3.19
KDM5CP41229 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
KDM5CP41229 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC34.96■■■■□ 3.19
KDM5CP41229 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC34.96■■■■□ 3.19
KDM5CP41229 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
KDM5CP41229 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
KDM5CP41229 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
KDM5CP41229 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.18
KDM5CP41229 SNX3-202ENST00000349379 890 ntTSL 2 BASIC34.95■■■■□ 3.18
KDM5CP41229 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC34.95■■■■□ 3.18
KDM5CP41229 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC34.94■■■■□ 3.18
KDM5CP41229 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC34.94■■■■□ 3.18
KDM5CP41229 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
KDM5CP41229 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
KDM5CP41229 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
KDM5CP41229 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC34.94■■■■□ 3.18
KDM5CP41229 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
KDM5CP41229 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
KDM5CP41229 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC34.93■■■■□ 3.18
KDM5CP41229 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
KDM5CP41229 MPST-208ENST00000628507 698 ntTSL 5 BASIC34.93■■■■□ 3.18
KDM5CP41229 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC34.93■■■■□ 3.18
KDM5CP41229 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC34.93■■■■□ 3.18
KDM5CP41229 AC009102.2-201ENST00000606772 1639 ntBASIC34.93■■■■□ 3.18
KDM5CP41229 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC34.92■■■■□ 3.18
KDM5CP41229 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
KDM5CP41229 AK1-201ENST00000223836 736 ntTSL 3 BASIC34.92■■■■□ 3.18
KDM5CP41229 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC34.92■■■■□ 3.18
KDM5CP41229 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
KDM5CP41229 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC34.91■■■■□ 3.18
KDM5CP41229 AC006455.2-201ENST00000429931 906 ntBASIC34.91■■■■□ 3.18
KDM5CP41229 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC34.91■■■■□ 3.18
KDM5CP41229 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
KDM5CP41229 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
KDM5CP41229 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC34.91■■■■□ 3.18
KDM5CP41229 REST-206ENST00000612429 1376 ntTSL 5 BASIC34.91■■■■□ 3.18
KDM5CP41229 REST-207ENST00000616975 1370 ntTSL 5 BASIC34.91■■■■□ 3.18
KDM5CP41229 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC34.9■■■■□ 3.18
KDM5CP41229 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
KDM5CP41229 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
KDM5CP41229 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC34.9■■■■□ 3.18
KDM5CP41229 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC34.9■■■■□ 3.18
KDM5CP41229 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC34.9■■■■□ 3.18
KDM5CP41229 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
KDM5CP41229 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC34.9■■■■□ 3.18
KDM5CP41229 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC34.89■■■■□ 3.18
KDM5CP41229 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC34.89■■■■□ 3.18
KDM5CP41229 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
KDM5CP41229 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
KDM5CP41229 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
KDM5CP41229 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
KDM5CP41229 YBX1P1-201ENST00000445822 960 ntBASIC34.88■■■■□ 3.17
KDM5CP41229 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC34.88■■■■□ 3.17
KDM5CP41229 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC34.88■■■■□ 3.17
KDM5CP41229 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
KDM5CP41229 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
KDM5CP41229 BX842568.3-201ENST00000418104 571 ntBASIC34.87■■■■□ 3.17
KDM5CP41229 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC34.87■■■■□ 3.17
KDM5CP41229 HES6-206ENST00000409574 738 ntTSL 2 BASIC34.87■■■■□ 3.17
KDM5CP41229 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
KDM5CP41229 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC34.87■■■■□ 3.17
KDM5CP41229 DUX4L2-201ENST00000561772 1275 ntBASIC34.87■■■■□ 3.17
KDM5CP41229 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC34.87■■■■□ 3.17
KDM5CP41229 DUX4L6-201ENST00000626483 1275 ntBASIC34.87■■■■□ 3.17
KDM5CP41229 DUX4L1-201ENST00000627662 1275 ntBASIC34.87■■■■□ 3.17
KDM5CP41229 DUX4L8-201ENST00000629013 1275 ntBASIC34.87■■■■□ 3.17
KDM5CP41229 DUX4L3-201ENST00000630187 1275 ntBASIC34.87■■■■□ 3.17
KDM5CP41229 DUX4L7-201ENST00000630678 1275 ntBASIC34.87■■■■□ 3.17
KDM5CP41229 DUX4L5-201ENST00000630834 1275 ntBASIC34.87■■■■□ 3.17
KDM5CP41229 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC34.86■■■■□ 3.17
KDM5CP41229 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC34.86■■■■□ 3.17
KDM5CP41229 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC34.86■■■■□ 3.17
KDM5CP41229 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC34.86■■■■□ 3.17
KDM5CP41229 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC34.86■■■■□ 3.17
KDM5CP41229 AC022517.1-201ENST00000592429 346 ntBASIC34.86■■■■□ 3.17
KDM5CP41229 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
KDM5CP41229 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
KDM5CP41229 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC34.85■■■■□ 3.17
KDM5CP41229 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC34.85■■■■□ 3.17
KDM5CP41229 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC34.85■■■■□ 3.17
KDM5CP41229 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC34.84■■■■□ 3.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms