Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A1P30531 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC6A1P30531 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC6A1P30531 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.81■□□□□ 0.76
SLC6A1P30531 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A1P30531 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SLC6A1P30531 FOXO3B-201ENST00000395675 1928 ntBASIC19.8■□□□□ 0.76
SLC6A1P30531 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A1P30531 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SLC6A1P30531 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A1P30531 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A1P30531 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A1P30531 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SLC6A1P30531 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.8■□□□□ 0.76
SLC6A1P30531 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A1P30531 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SLC6A1P30531 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SLC6A1P30531 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SLC6A1P30531 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SLC6A1P30531 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SLC6A1P30531 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC6A1P30531 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A1P30531 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A1P30531 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A1P30531 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SLC6A1P30531 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC6A1P30531 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SLC6A1P30531 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC6A1P30531 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A1P30531 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC6A1P30531 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A1P30531 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SLC6A1P30531 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC6A1P30531 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SLC6A1P30531 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A1P30531 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC6A1P30531 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
SLC6A1P30531 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC6A1P30531 SLC25A24-204ENST00000569674 2357 ntBASIC19.78■□□□□ 0.76
SLC6A1P30531 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A1P30531 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A1P30531 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SLC6A1P30531 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SLC6A1P30531 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A1P30531 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A1P30531 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A1P30531 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.77■□□□□ 0.75
SLC6A1P30531 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A1P30531 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC6A1P30531 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A1P30531 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A1P30531 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A1P30531 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SLC6A1P30531 HLA-L-211ENST00000482052 1765 ntBASIC19.76■□□□□ 0.75
SLC6A1P30531 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC6A1P30531 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A1P30531 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC6A1P30531 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A1P30531 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SLC6A1P30531 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A1P30531 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A1P30531 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A1P30531 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A1P30531 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SLC6A1P30531 DUSP8P3-201ENST00000399571 1760 ntBASIC19.75■□□□□ 0.75
SLC6A1P30531 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A1P30531 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A1P30531 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A1P30531 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
SLC6A1P30531 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A1P30531 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC6A1P30531 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SLC6A1P30531 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SLC6A1P30531 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SLC6A1P30531 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A1P30531 AL359504.2-201ENST00000605506 1601 ntBASIC19.74■□□□□ 0.75
SLC6A1P30531 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A1P30531 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A1P30531 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SLC6A1P30531 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A1P30531 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A1P30531 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A1P30531 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A1P30531 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A1P30531 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A1P30531 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A1P30531 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A1P30531 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A1P30531 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A1P30531 AL137060.1-201ENST00000618151 2648 ntBASIC19.73■□□□□ 0.75
SLC6A1P30531 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SLC6A1P30531 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
SLC6A1P30531 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A1P30531 ANOS2P-203ENST00000472227 1816 ntBASIC19.72■□□□□ 0.75
SLC6A1P30531 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A1P30531 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A1P30531 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC6A1P30531 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.72■□□□□ 0.75
SLC6A1P30531 AC148477.6-201ENST00000623746 465 ntBASIC19.72■□□□□ 0.75
SLC6A1P30531 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms