Protein–RNA interactions for Protein: P18077

RPL35A, 60S ribosomal protein L35a, humanhuman

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35AP18077 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPL35AP18077 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPL35AP18077 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.04■□□□□ 0.32
RPL35AP18077 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.04■□□□□ 0.32
RPL35AP18077 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPL35AP18077 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPL35AP18077 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPL35AP18077 AC142381.3-201ENST00000568208 1670 ntBASIC17.04■□□□□ 0.32
RPL35AP18077 AC138932.3-201ENST00000567634 1902 ntBASIC17.04■□□□□ 0.32
RPL35AP18077 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPL35AP18077 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPL35AP18077 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPL35AP18077 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPL35AP18077 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPL35AP18077 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RPL35AP18077 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPL35AP18077 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.03■□□□□ 0.32
RPL35AP18077 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.03■□□□□ 0.32
RPL35AP18077 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPL35AP18077 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPL35AP18077 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPL35AP18077 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPL35AP18077 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
RPL35AP18077 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.02■□□□□ 0.32
RPL35AP18077 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPL35AP18077 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPL35AP18077 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPL35AP18077 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPL35AP18077 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RPL35AP18077 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPL35AP18077 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.02■□□□□ 0.32
RPL35AP18077 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RPL35AP18077 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RPL35AP18077 HLA-L-211ENST00000482052 1765 ntBASIC17.02■□□□□ 0.31
RPL35AP18077 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RPL35AP18077 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.02■□□□□ 0.31
RPL35AP18077 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPL35AP18077 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPL35AP18077 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPL35AP18077 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPL35AP18077 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPL35AP18077 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPL35AP18077 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RPL35AP18077 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.01■□□□□ 0.31
RPL35AP18077 SNX5-217ENST00000606557 1087 ntBASIC17.01■□□□□ 0.31
RPL35AP18077 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.01■□□□□ 0.31
RPL35AP18077 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RPL35AP18077 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.01■□□□□ 0.31
RPL35AP18077 AC135731.1-201ENST00000569415 2548 ntBASIC17.01■□□□□ 0.31
RPL35AP18077 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPL35AP18077 AP003733.4-201ENST00000623785 1697 ntBASIC17.01■□□□□ 0.31
RPL35AP18077 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17■□□□□ 0.31
RPL35AP18077 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17■□□□□ 0.31
RPL35AP18077 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPL35AP18077 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPL35AP18077 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RPL35AP18077 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
RPL35AP18077 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RPL35AP18077 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17■□□□□ 0.31
RPL35AP18077 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17■□□□□ 0.31
RPL35AP18077 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RPL35AP18077 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17■□□□□ 0.31
RPL35AP18077 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RPL35AP18077 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17■□□□□ 0.31
RPL35AP18077 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPL35AP18077 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17■□□□□ 0.31
RPL35AP18077 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPL35AP18077 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.99■□□□□ 0.31
RPL35AP18077 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RPL35AP18077 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPL35AP18077 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.99■□□□□ 0.31
RPL35AP18077 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.99■□□□□ 0.31
RPL35AP18077 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPL35AP18077 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RPL35AP18077 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.99■□□□□ 0.31
RPL35AP18077 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.99■□□□□ 0.31
RPL35AP18077 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RPL35AP18077 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.98■□□□□ 0.31
RPL35AP18077 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPL35AP18077 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.98■□□□□ 0.31
RPL35AP18077 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPL35AP18077 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.98■□□□□ 0.31
RPL35AP18077 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.98■□□□□ 0.31
RPL35AP18077 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.98■□□□□ 0.31
RPL35AP18077 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RPL35AP18077 AL022069.1-201ENST00000568025 1636 ntBASIC16.98■□□□□ 0.31
RPL35AP18077 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPL35AP18077 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.97■□□□□ 0.31
RPL35AP18077 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
RPL35AP18077 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPL35AP18077 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPL35AP18077 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.97■□□□□ 0.31
RPL35AP18077 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPL35AP18077 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.97■□□□□ 0.31
RPL35AP18077 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.97■□□□□ 0.31
RPL35AP18077 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPL35AP18077 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.97■□□□□ 0.31
RPL35AP18077 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPL35AP18077 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RPL35AP18077 AC131274.2-201ENST00000580697 1507 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms