Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
TIMP2P16035 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TIMP2P16035 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.1■■□□□ 1.29
TIMP2P16035 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
TIMP2P16035 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
TIMP2P16035 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TIMP2P16035 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.09■■□□□ 1.29
TIMP2P16035 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TIMP2P16035 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.09■■□□□ 1.29
TIMP2P16035 AC135731.1-201ENST00000569415 2548 ntBASIC23.08■■□□□ 1.29
TIMP2P16035 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TIMP2P16035 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.08■■□□□ 1.29
TIMP2P16035 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.08■■□□□ 1.29
TIMP2P16035 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TIMP2P16035 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
TIMP2P16035 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
TIMP2P16035 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TIMP2P16035 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.07■■□□□ 1.28
TIMP2P16035 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.07■■□□□ 1.28
TIMP2P16035 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.07■■□□□ 1.28
TIMP2P16035 AL356740.2-201ENST00000601559 647 ntBASIC23.07■■□□□ 1.28
TIMP2P16035 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.07■■□□□ 1.28
TIMP2P16035 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TIMP2P16035 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
TIMP2P16035 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TIMP2P16035 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.07■■□□□ 1.28
TIMP2P16035 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TIMP2P16035 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TIMP2P16035 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
TIMP2P16035 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TIMP2P16035 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
TIMP2P16035 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.06■■□□□ 1.28
TIMP2P16035 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.06■■□□□ 1.28
TIMP2P16035 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TIMP2P16035 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
TIMP2P16035 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TIMP2P16035 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
TIMP2P16035 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.05■■□□□ 1.28
TIMP2P16035 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.05■■□□□ 1.28
TIMP2P16035 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.05■■□□□ 1.28
TIMP2P16035 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.05■■□□□ 1.28
TIMP2P16035 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.05■■□□□ 1.28
TIMP2P16035 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TIMP2P16035 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TIMP2P16035 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.05■■□□□ 1.28
TIMP2P16035 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TIMP2P16035 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.05■■□□□ 1.28
TIMP2P16035 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TIMP2P16035 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.04■■□□□ 1.28
TIMP2P16035 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.04■■□□□ 1.28
TIMP2P16035 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TIMP2P16035 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.04■■□□□ 1.28
TIMP2P16035 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.04■■□□□ 1.28
TIMP2P16035 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.04■■□□□ 1.28
TIMP2P16035 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.04■■□□□ 1.28
TIMP2P16035 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.04■■□□□ 1.28
TIMP2P16035 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TIMP2P16035 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.03■■□□□ 1.28
TIMP2P16035 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TIMP2P16035 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.03■■□□□ 1.28
TIMP2P16035 AC008406.3-201ENST00000620001 1374 ntBASIC23.02■■□□□ 1.28
TIMP2P16035 AL161729.1-201ENST00000604104 1402 ntBASIC23.02■■□□□ 1.28
TIMP2P16035 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TIMP2P16035 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TIMP2P16035 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.02■■□□□ 1.28
TIMP2P16035 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TIMP2P16035 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
TIMP2P16035 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TIMP2P16035 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TIMP2P16035 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
TIMP2P16035 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TIMP2P16035 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TIMP2P16035 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TIMP2P16035 AC131281.2-201ENST00000520478 145 ntBASIC23.01■■□□□ 1.27
TIMP2P16035 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.01■■□□□ 1.27
TIMP2P16035 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.01■■□□□ 1.27
TIMP2P16035 AC005703.6-201ENST00000623265 1329 ntBASIC23.01■■□□□ 1.27
TIMP2P16035 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TIMP2P16035 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TIMP2P16035 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
TIMP2P16035 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23■■□□□ 1.27
TIMP2P16035 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23■■□□□ 1.27
TIMP2P16035 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23■■□□□ 1.27
TIMP2P16035 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
TIMP2P16035 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.99■■□□□ 1.27
TIMP2P16035 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TIMP2P16035 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.99■■□□□ 1.27
TIMP2P16035 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
TIMP2P16035 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TIMP2P16035 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TIMP2P16035 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TIMP2P16035 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.99■■□□□ 1.27
TIMP2P16035 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.99■■□□□ 1.27
TIMP2P16035 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TIMP2P16035 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TIMP2P16035 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TIMP2P16035 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TIMP2P16035 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TIMP2P16035 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
TIMP2P16035 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms