Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.37■□□□□ 0.85
SPARCP09486 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPARCP09486 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPARCP09486 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPARCP09486 DUSP8P5-201ENST00000422884 1815 ntBASIC20.37■□□□□ 0.85
SPARCP09486 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
SPARCP09486 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPARCP09486 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPARCP09486 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPARCP09486 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPARCP09486 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPARCP09486 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
SPARCP09486 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPARCP09486 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPARCP09486 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPARCP09486 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPARCP09486 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPARCP09486 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPARCP09486 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SPARCP09486 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPARCP09486 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.35■□□□□ 0.85
SPARCP09486 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPARCP09486 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SPARCP09486 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.35■□□□□ 0.85
SPARCP09486 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SPARCP09486 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.34■□□□□ 0.85
SPARCP09486 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPARCP09486 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SPARCP09486 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SPARCP09486 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPARCP09486 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPARCP09486 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SPARCP09486 ABHD17AP5-201ENST00000580133 923 ntBASIC20.34■□□□□ 0.85
SPARCP09486 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPARCP09486 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SPARCP09486 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPARCP09486 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SPARCP09486 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SPARCP09486 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPARCP09486 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.33■□□□□ 0.85
SPARCP09486 AC133561.1-201ENST00000568600 2415 ntBASIC20.33■□□□□ 0.85
SPARCP09486 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPARCP09486 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SPARCP09486 AC139795.1-202ENST00000500444 432 ntBASIC20.33■□□□□ 0.85
SPARCP09486 DUX4L18-201ENST00000553347 1267 ntBASIC20.33■□□□□ 0.85
SPARCP09486 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SPARCP09486 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPARCP09486 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SPARCP09486 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SPARCP09486 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPARCP09486 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.33■□□□□ 0.84
SPARCP09486 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPARCP09486 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPARCP09486 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPARCP09486 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
SPARCP09486 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.32■□□□□ 0.84
SPARCP09486 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.32■□□□□ 0.84
SPARCP09486 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SPARCP09486 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPARCP09486 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPARCP09486 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.32■□□□□ 0.84
SPARCP09486 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
SPARCP09486 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPARCP09486 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SPARCP09486 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPARCP09486 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
SPARCP09486 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPARCP09486 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPARCP09486 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.31■□□□□ 0.84
SPARCP09486 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPARCP09486 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SPARCP09486 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPARCP09486 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPARCP09486 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SPARCP09486 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPARCP09486 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.3■□□□□ 0.84
SPARCP09486 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.3■□□□□ 0.84
SPARCP09486 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPARCP09486 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPARCP09486 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SPARCP09486 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPARCP09486 NTF6A-201ENST00000591175 560 ntBASIC20.3■□□□□ 0.84
SPARCP09486 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.3■□□□□ 0.84
SPARCP09486 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPARCP09486 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPARCP09486 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.3■□□□□ 0.84
SPARCP09486 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPARCP09486 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPARCP09486 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPARCP09486 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SPARCP09486 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPARCP09486 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPARCP09486 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPARCP09486 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPARCP09486 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.29■□□□□ 0.84
SPARCP09486 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPARCP09486 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPARCP09486 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
SPARCP09486 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.29■□□□□ 0.84
SPARCP09486 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms