Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.6■■■□□ 2.49
NEFMP07197 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NEFMP07197 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC30.6■■■□□ 2.49
NEFMP07197 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
NEFMP07197 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
NEFMP07197 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
NEFMP07197 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.6■■■□□ 2.49
NEFMP07197 AC131212.1-201ENST00000613771 668 ntBASIC30.6■■■□□ 2.49
NEFMP07197 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NEFMP07197 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
NEFMP07197 SNX5-217ENST00000606557 1087 ntBASIC30.59■■■□□ 2.49
NEFMP07197 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.59■■■□□ 2.49
NEFMP07197 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NEFMP07197 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
NEFMP07197 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
NEFMP07197 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC30.58■■■□□ 2.49
NEFMP07197 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC30.58■■■□□ 2.49
NEFMP07197 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NEFMP07197 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
NEFMP07197 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NEFMP07197 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.58■■■□□ 2.49
NEFMP07197 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NEFMP07197 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
NEFMP07197 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
NEFMP07197 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NEFMP07197 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NEFMP07197 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
NEFMP07197 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NEFMP07197 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
NEFMP07197 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
NEFMP07197 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC30.56■■■□□ 2.48
NEFMP07197 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
NEFMP07197 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.56■■■□□ 2.48
NEFMP07197 AL022069.1-201ENST00000568025 1636 ntBASIC30.56■■■□□ 2.48
NEFMP07197 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
NEFMP07197 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.56■■■□□ 2.48
NEFMP07197 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.56■■■□□ 2.48
NEFMP07197 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC30.56■■■□□ 2.48
NEFMP07197 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
NEFMP07197 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
NEFMP07197 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
NEFMP07197 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
NEFMP07197 AC004448.1-201ENST00000458332 883 ntBASIC30.55■■■□□ 2.48
NEFMP07197 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
NEFMP07197 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC30.55■■■□□ 2.48
NEFMP07197 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
NEFMP07197 HLA-L-211ENST00000482052 1765 ntBASIC30.54■■■□□ 2.48
NEFMP07197 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
NEFMP07197 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
NEFMP07197 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
NEFMP07197 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
NEFMP07197 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
NEFMP07197 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
NEFMP07197 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.53■■■□□ 2.48
NEFMP07197 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
NEFMP07197 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.53■■■□□ 2.48
NEFMP07197 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
NEFMP07197 MIR6724-1-201ENST00000616420 92 ntBASIC30.53■■■□□ 2.48
NEFMP07197 MIR6724-2-201ENST00000616483 92 ntBASIC30.53■■■□□ 2.48
NEFMP07197 MIR6722-201ENST00000617286 78 ntBASIC30.53■■■□□ 2.48
NEFMP07197 MIR6724-4-201ENST00000617390 92 ntBASIC30.53■■■□□ 2.48
NEFMP07197 MIR6724-3-201ENST00000622482 92 ntBASIC30.53■■■□□ 2.48
NEFMP07197 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.53■■■□□ 2.48
NEFMP07197 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC30.53■■■□□ 2.48
NEFMP07197 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC30.53■■■□□ 2.48
NEFMP07197 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
NEFMP07197 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
NEFMP07197 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.52■■■□□ 2.48
NEFMP07197 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC30.52■■■□□ 2.48
NEFMP07197 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
NEFMP07197 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.52■■■□□ 2.48
NEFMP07197 AC138932.3-201ENST00000567634 1902 ntBASIC30.51■■■□□ 2.48
NEFMP07197 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC30.51■■■□□ 2.48
NEFMP07197 MED17-227ENST00000640521 2047 ntTSL 5 BASIC30.51■■■□□ 2.47
NEFMP07197 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC30.51■■■□□ 2.47
NEFMP07197 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.51■■■□□ 2.47
NEFMP07197 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC30.5■■■□□ 2.47
NEFMP07197 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC30.5■■■□□ 2.47
NEFMP07197 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NEFMP07197 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NEFMP07197 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
NEFMP07197 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NEFMP07197 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC30.5■■■□□ 2.47
NEFMP07197 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
NEFMP07197 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
NEFMP07197 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NEFMP07197 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NEFMP07197 AC131274.2-201ENST00000580697 1507 ntBASIC30.49■■■□□ 2.47
NEFMP07197 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
NEFMP07197 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC30.48■■■□□ 2.47
NEFMP07197 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
NEFMP07197 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30.48■■■□□ 2.47
NEFMP07197 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.48■■■□□ 2.47
NEFMP07197 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
NEFMP07197 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC30.48■■■□□ 2.47
NEFMP07197 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
NEFMP07197 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NEFMP07197 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NEFMP07197 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.47■■■□□ 2.47
NEFMP07197 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms