Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND1P03886 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
MT-ND1P03886 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND1P03886 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND1P03886 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND1P03886 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND1P03886 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
MT-ND1P03886 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
MT-ND1P03886 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MT-ND1P03886 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-ND1P03886 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
MT-ND1P03886 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
MT-ND1P03886 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-ND1P03886 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-ND1P03886 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.6■■□□□ 1.05
MT-ND1P03886 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-ND1P03886 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MT-ND1P03886 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MT-ND1P03886 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-ND1P03886 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
MT-ND1P03886 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MT-ND1P03886 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.59■■□□□ 1.05
MT-ND1P03886 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MT-ND1P03886 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MT-ND1P03886 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MT-ND1P03886 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.59■■□□□ 1.05
MT-ND1P03886 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.59■■□□□ 1.05
MT-ND1P03886 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
MT-ND1P03886 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
MT-ND1P03886 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MT-ND1P03886 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
MT-ND1P03886 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.58■■□□□ 1.05
MT-ND1P03886 AC093536.1-201ENST00000569153 554 ntBASIC21.58■■□□□ 1.05
MT-ND1P03886 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
MT-ND1P03886 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MT-ND1P03886 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MT-ND1P03886 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.57■■□□□ 1.04
MT-ND1P03886 LINC00565-201ENST00000562710 2331 ntBASIC21.57■■□□□ 1.04
MT-ND1P03886 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-ND1P03886 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-ND1P03886 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MT-ND1P03886 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-ND1P03886 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-ND1P03886 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-ND1P03886 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-ND1P03886 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.57■■□□□ 1.04
MT-ND1P03886 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.57■■□□□ 1.04
MT-ND1P03886 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MT-ND1P03886 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
MT-ND1P03886 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.56■■□□□ 1.04
MT-ND1P03886 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND1P03886 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.56■■□□□ 1.04
MT-ND1P03886 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND1P03886 AC007029.1-201ENST00000604183 313 ntBASIC21.56■■□□□ 1.04
MT-ND1P03886 FOXO3B-201ENST00000395675 1928 ntBASIC21.56■■□□□ 1.04
MT-ND1P03886 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND1P03886 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.56■■□□□ 1.04
MT-ND1P03886 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND1P03886 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND1P03886 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND1P03886 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.56■■□□□ 1.04
MT-ND1P03886 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
MT-ND1P03886 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
MT-ND1P03886 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.56■■□□□ 1.04
MT-ND1P03886 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND1P03886 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.55■■□□□ 1.04
MT-ND1P03886 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND1P03886 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND1P03886 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND1P03886 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
MT-ND1P03886 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.55■■□□□ 1.04
MT-ND1P03886 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND1P03886 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
MT-ND1P03886 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MT-ND1P03886 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.55■■□□□ 1.04
MT-ND1P03886 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-ND1P03886 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.54■■□□□ 1.04
MT-ND1P03886 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.54■■□□□ 1.04
MT-ND1P03886 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.54■■□□□ 1.04
MT-ND1P03886 GPX1-201ENST00000419349 1106 ntBASIC21.54■■□□□ 1.04
MT-ND1P03886 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
MT-ND1P03886 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.54■■□□□ 1.04
MT-ND1P03886 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.54■■□□□ 1.04
MT-ND1P03886 C1orf229-201ENST00000623686 2258 ntBASIC21.54■■□□□ 1.04
MT-ND1P03886 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MT-ND1P03886 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
MT-ND1P03886 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.54■■□□□ 1.04
MT-ND1P03886 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MT-ND1P03886 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
MT-ND1P03886 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MT-ND1P03886 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
MT-ND1P03886 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
MT-ND1P03886 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
MT-ND1P03886 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.53■■□□□ 1.04
MT-ND1P03886 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.53■■□□□ 1.04
MT-ND1P03886 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MT-ND1P03886 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.53■■□□□ 1.04
MT-ND1P03886 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MT-ND1P03886 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MT-ND1P03886 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms