Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIX6O95475 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIX6O95475 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SIX6O95475 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SIX6O95475 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX6O95475 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIX6O95475 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SIX6O95475 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIX6O95475 SUZ12P1-203ENST00000578195 985 ntBASIC19.22■□□□□ 0.67
SIX6O95475 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX6O95475 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX6O95475 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIX6O95475 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX6O95475 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX6O95475 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
SIX6O95475 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.22■□□□□ 0.67
SIX6O95475 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SIX6O95475 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
SIX6O95475 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.21■□□□□ 0.67
SIX6O95475 FOXO3B-201ENST00000395675 1928 ntBASIC19.21■□□□□ 0.67
SIX6O95475 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIX6O95475 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIX6O95475 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIX6O95475 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.21■□□□□ 0.67
SIX6O95475 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIX6O95475 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIX6O95475 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIX6O95475 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SIX6O95475 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIX6O95475 ECEL1P1-201ENST00000373592 1742 ntBASIC19.2■□□□□ 0.66
SIX6O95475 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIX6O95475 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIX6O95475 ANOS2P-203ENST00000472227 1816 ntBASIC19.2■□□□□ 0.66
SIX6O95475 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIX6O95475 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SIX6O95475 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.19■□□□□ 0.66
SIX6O95475 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIX6O95475 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIX6O95475 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SIX6O95475 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SIX6O95475 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIX6O95475 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIX6O95475 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIX6O95475 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIX6O95475 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.18■□□□□ 0.66
SIX6O95475 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIX6O95475 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIX6O95475 DUX4L28-201ENST00000623687 678 ntBASIC19.18■□□□□ 0.66
SIX6O95475 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SIX6O95475 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SIX6O95475 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SIX6O95475 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIX6O95475 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIX6O95475 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIX6O95475 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SIX6O95475 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX6O95475 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX6O95475 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.17■□□□□ 0.66
SIX6O95475 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SIX6O95475 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX6O95475 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX6O95475 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SIX6O95475 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX6O95475 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIX6O95475 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIX6O95475 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX6O95475 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.16■□□□□ 0.66
SIX6O95475 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX6O95475 AL359258.2-201ENST00000564063 1566 ntBASIC19.16■□□□□ 0.66
SIX6O95475 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX6O95475 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX6O95475 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIX6O95475 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.16■□□□□ 0.66
SIX6O95475 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIX6O95475 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SIX6O95475 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.16■□□□□ 0.66
SIX6O95475 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX6O95475 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX6O95475 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SIX6O95475 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIX6O95475 DUSP8P3-201ENST00000399571 1760 ntBASIC19.15■□□□□ 0.66
SIX6O95475 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
SIX6O95475 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SIX6O95475 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.15■□□□□ 0.66
SIX6O95475 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX6O95475 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX6O95475 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIX6O95475 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX6O95475 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.15■□□□□ 0.66
SIX6O95475 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SIX6O95475 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
SIX6O95475 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.14■□□□□ 0.66
SIX6O95475 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SIX6O95475 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX6O95475 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX6O95475 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX6O95475 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX6O95475 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX6O95475 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX6O95475 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms