Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
SRGAP3O43295 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
SRGAP3O43295 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
SRGAP3O43295 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.67■■■□□ 2.18
SRGAP3O43295 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SRGAP3O43295 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.67■■■□□ 2.18
SRGAP3O43295 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.67■■■□□ 2.18
SRGAP3O43295 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC28.67■■■□□ 2.18
SRGAP3O43295 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
SRGAP3O43295 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC28.67■■■□□ 2.18
SRGAP3O43295 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SRGAP3O43295 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC28.67■■■□□ 2.18
SRGAP3O43295 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SRGAP3O43295 AL356441.2-201ENST00000443009 864 ntBASIC28.66■■■□□ 2.18
SRGAP3O43295 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.66■■■□□ 2.18
SRGAP3O43295 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC28.66■■■□□ 2.18
SRGAP3O43295 AC010997.5-201ENST00000609182 354 ntBASIC28.66■■■□□ 2.18
SRGAP3O43295 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
SRGAP3O43295 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SRGAP3O43295 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.66■■■□□ 2.18
SRGAP3O43295 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SRGAP3O43295 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.65■■■□□ 2.18
SRGAP3O43295 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SRGAP3O43295 KRT16P3-201ENST00000439127 1283 ntBASIC28.65■■■□□ 2.18
SRGAP3O43295 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
SRGAP3O43295 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
SRGAP3O43295 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.65■■■□□ 2.18
SRGAP3O43295 MTDHP2-201ENST00000601468 714 ntBASIC28.65■■■□□ 2.18
SRGAP3O43295 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.65■■■□□ 2.18
SRGAP3O43295 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
SRGAP3O43295 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC28.64■■■□□ 2.18
SRGAP3O43295 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC28.64■■■□□ 2.18
SRGAP3O43295 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SRGAP3O43295 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC28.64■■■□□ 2.18
SRGAP3O43295 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC28.64■■■□□ 2.18
SRGAP3O43295 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.64■■■□□ 2.18
SRGAP3O43295 GRAMD4P7-201ENST00000578182 1232 ntBASIC28.64■■■□□ 2.18
SRGAP3O43295 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC28.64■■■□□ 2.18
SRGAP3O43295 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SRGAP3O43295 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
SRGAP3O43295 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
SRGAP3O43295 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
SRGAP3O43295 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SRGAP3O43295 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SRGAP3O43295 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SRGAP3O43295 PREB-202ENST00000406567 1910 ntTSL 5 BASIC28.63■■■□□ 2.17
SRGAP3O43295 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SRGAP3O43295 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC28.63■■■□□ 2.17
SRGAP3O43295 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SRGAP3O43295 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
SRGAP3O43295 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SRGAP3O43295 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SRGAP3O43295 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC28.62■■■□□ 2.17
SRGAP3O43295 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC28.62■■■□□ 2.17
SRGAP3O43295 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SRGAP3O43295 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SRGAP3O43295 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.62■■■□□ 2.17
SRGAP3O43295 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
SRGAP3O43295 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SRGAP3O43295 LINC00543-201ENST00000567234 1845 ntBASIC28.62■■■□□ 2.17
SRGAP3O43295 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
SRGAP3O43295 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC28.62■■■□□ 2.17
SRGAP3O43295 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SRGAP3O43295 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SRGAP3O43295 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.61■■■□□ 2.17
SRGAP3O43295 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
SRGAP3O43295 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SRGAP3O43295 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.61■■■□□ 2.17
SRGAP3O43295 MIR6722-201ENST00000617286 78 ntBASIC28.61■■■□□ 2.17
SRGAP3O43295 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC28.6■■■□□ 2.17
SRGAP3O43295 AL161729.1-201ENST00000604104 1402 ntBASIC28.6■■■□□ 2.17
SRGAP3O43295 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.6■■■□□ 2.17
SRGAP3O43295 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SRGAP3O43295 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC28.6■■■□□ 2.17
SRGAP3O43295 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SRGAP3O43295 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC28.59■■■□□ 2.17
SRGAP3O43295 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
SRGAP3O43295 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC28.59■■■□□ 2.17
SRGAP3O43295 EXOG-217ENST00000630638 197 ntTSL 5 BASIC28.59■■■□□ 2.17
SRGAP3O43295 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
SRGAP3O43295 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SRGAP3O43295 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
SRGAP3O43295 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
SRGAP3O43295 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SRGAP3O43295 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
SRGAP3O43295 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SRGAP3O43295 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
SRGAP3O43295 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SRGAP3O43295 CD72-202ENST00000378430 585 ntTSL 3 BASIC28.56■■■□□ 2.16
SRGAP3O43295 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
SRGAP3O43295 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SRGAP3O43295 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
SRGAP3O43295 AC141586.4-201ENST00000624558 1573 ntBASIC28.55■■■□□ 2.16
SRGAP3O43295 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC28.55■■■□□ 2.16
SRGAP3O43295 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.55■■■□□ 2.16
SRGAP3O43295 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SRGAP3O43295 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
SRGAP3O43295 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SRGAP3O43295 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SRGAP3O43295 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms