Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.68■□□□□ 0.9
TNFSF11O14788 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TNFSF11O14788 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.68■□□□□ 0.9
TNFSF11O14788 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF11O14788 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF11O14788 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF11O14788 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TNFSF11O14788 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF11O14788 AL139125.2-201ENST00000623134 1869 ntBASIC20.67■□□□□ 0.9
TNFSF11O14788 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF11O14788 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF11O14788 AL356441.2-201ENST00000443009 864 ntBASIC20.67■□□□□ 0.9
TNFSF11O14788 AC004448.1-201ENST00000458332 883 ntBASIC20.67■□□□□ 0.9
TNFSF11O14788 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.67■□□□□ 0.9
TNFSF11O14788 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.67■□□□□ 0.9
TNFSF11O14788 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.67■□□□□ 0.9
TNFSF11O14788 AC010997.5-201ENST00000609182 354 ntBASIC20.67■□□□□ 0.9
TNFSF11O14788 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TNFSF11O14788 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TNFSF11O14788 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF11O14788 LINC01124-201ENST00000409786 2117 ntBASIC20.66■□□□□ 0.9
TNFSF11O14788 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF11O14788 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF11O14788 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF11O14788 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.66■□□□□ 0.9
TNFSF11O14788 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF11O14788 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.66■□□□□ 0.9
TNFSF11O14788 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF11O14788 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF11O14788 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.66■□□□□ 0.9
TNFSF11O14788 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF11O14788 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF11O14788 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF11O14788 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF11O14788 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF11O14788 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF11O14788 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
TNFSF11O14788 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TNFSF11O14788 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF11O14788 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF11O14788 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF11O14788 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF11O14788 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TNFSF11O14788 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
TNFSF11O14788 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.64■□□□□ 0.9
TNFSF11O14788 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFSF11O14788 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFSF11O14788 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.64■□□□□ 0.89
TNFSF11O14788 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TNFSF11O14788 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF11O14788 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF11O14788 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF11O14788 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF11O14788 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF11O14788 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.63■□□□□ 0.89
TNFSF11O14788 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.62■□□□□ 0.89
TNFSF11O14788 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TNFSF11O14788 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF11O14788 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF11O14788 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF11O14788 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.62■□□□□ 0.89
TNFSF11O14788 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF11O14788 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TNFSF11O14788 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TNFSF11O14788 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TNFSF11O14788 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TNFSF11O14788 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNFSF11O14788 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.61■□□□□ 0.89
TNFSF11O14788 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.61■□□□□ 0.89
TNFSF11O14788 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.61■□□□□ 0.89
TNFSF11O14788 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.61■□□□□ 0.89
TNFSF11O14788 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.61■□□□□ 0.89
TNFSF11O14788 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.61■□□□□ 0.89
TNFSF11O14788 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFSF11O14788 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.6■□□□□ 0.89
TNFSF11O14788 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.6■□□□□ 0.89
TNFSF11O14788 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFSF11O14788 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.6■□□□□ 0.89
TNFSF11O14788 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TNFSF11O14788 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.6■□□□□ 0.89
TNFSF11O14788 MIR6722-201ENST00000617286 78 ntBASIC20.6■□□□□ 0.89
TNFSF11O14788 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.6■□□□□ 0.89
TNFSF11O14788 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.6■□□□□ 0.89
TNFSF11O14788 AL161729.1-201ENST00000604104 1402 ntBASIC20.6■□□□□ 0.89
TNFSF11O14788 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TNFSF11O14788 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF11O14788 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF11O14788 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.59■□□□□ 0.89
TNFSF11O14788 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF11O14788 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF11O14788 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.59■□□□□ 0.89
TNFSF11O14788 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF11O14788 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TNFSF11O14788 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF11O14788 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TNFSF11O14788 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNFSF11O14788 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.58■□□□□ 0.89
TNFSF11O14788 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.58■□□□□ 0.89
TNFSF11O14788 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TNFSF11O14788 AC131212.1-201ENST00000613771 668 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms