Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
APAF1O14727 SHD-204ENST00000599689 1729 ntTSL 5 BASIC30.42■■■□□ 2.46
APAF1O14727 AL022069.1-201ENST00000568025 1636 ntBASIC30.41■■■□□ 2.46
APAF1O14727 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.41■■■□□ 2.46
APAF1O14727 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
APAF1O14727 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
APAF1O14727 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
APAF1O14727 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
APAF1O14727 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.4■■■□□ 2.46
APAF1O14727 Z92544.1-202ENST00000571933 1220 ntBASIC30.4■■■□□ 2.46
APAF1O14727 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC30.4■■■□□ 2.46
APAF1O14727 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
APAF1O14727 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
APAF1O14727 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
APAF1O14727 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
APAF1O14727 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
APAF1O14727 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC30.39■■■□□ 2.46
APAF1O14727 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
APAF1O14727 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
APAF1O14727 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
APAF1O14727 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
APAF1O14727 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
APAF1O14727 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC30.38■■■□□ 2.45
APAF1O14727 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC30.38■■■□□ 2.45
APAF1O14727 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.38■■■□□ 2.45
APAF1O14727 ABCB10P4-201ENST00000566803 2184 ntBASIC30.38■■■□□ 2.45
APAF1O14727 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
APAF1O14727 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
APAF1O14727 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
APAF1O14727 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.37■■■□□ 2.45
APAF1O14727 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC30.37■■■□□ 2.45
APAF1O14727 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
APAF1O14727 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.36■■■□□ 2.45
APAF1O14727 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
APAF1O14727 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC30.35■■■□□ 2.45
APAF1O14727 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.35■■■□□ 2.45
APAF1O14727 AC004448.1-201ENST00000458332 883 ntBASIC30.35■■■□□ 2.45
APAF1O14727 SNX5-217ENST00000606557 1087 ntBASIC30.35■■■□□ 2.45
APAF1O14727 MIR4787-201ENST00000607364 84 ntBASIC30.35■■■□□ 2.45
APAF1O14727 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC30.35■■■□□ 2.45
APAF1O14727 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
APAF1O14727 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
APAF1O14727 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
APAF1O14727 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
APAF1O14727 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.33■■■□□ 2.45
APAF1O14727 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
APAF1O14727 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
APAF1O14727 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC30.33■■■□□ 2.45
APAF1O14727 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
APAF1O14727 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
APAF1O14727 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.32■■■□□ 2.44
APAF1O14727 STK32C-205ENST00000456004 607 ntTSL 2 BASIC30.32■■■□□ 2.44
APAF1O14727 KRT125P-201ENST00000546827 989 ntBASIC30.32■■■□□ 2.44
APAF1O14727 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC30.32■■■□□ 2.44
APAF1O14727 AC092028.1-203ENST00000608262 953 ntBASIC30.32■■■□□ 2.44
APAF1O14727 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
APAF1O14727 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
APAF1O14727 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
APAF1O14727 AL161729.1-201ENST00000604104 1402 ntBASIC30.31■■■□□ 2.44
APAF1O14727 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
APAF1O14727 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC30.31■■■□□ 2.44
APAF1O14727 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
APAF1O14727 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.31■■■□□ 2.44
APAF1O14727 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
APAF1O14727 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
APAF1O14727 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
APAF1O14727 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
APAF1O14727 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
APAF1O14727 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC30.3■■■□□ 2.44
APAF1O14727 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
APAF1O14727 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
APAF1O14727 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
APAF1O14727 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
APAF1O14727 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
APAF1O14727 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.3■■■□□ 2.44
APAF1O14727 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.3■■■□□ 2.44
APAF1O14727 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.3■■■□□ 2.44
APAF1O14727 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
APAF1O14727 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
APAF1O14727 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
APAF1O14727 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC30.29■■■□□ 2.44
APAF1O14727 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC30.29■■■□□ 2.44
APAF1O14727 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
APAF1O14727 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
APAF1O14727 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
APAF1O14727 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
APAF1O14727 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.28■■■□□ 2.44
APAF1O14727 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.28■■■□□ 2.44
APAF1O14727 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.28■■■□□ 2.44
APAF1O14727 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
APAF1O14727 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
APAF1O14727 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
APAF1O14727 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
APAF1O14727 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
APAF1O14727 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.27■■■□□ 2.44
APAF1O14727 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
APAF1O14727 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
APAF1O14727 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC30.27■■■□□ 2.44
APAF1O14727 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
APAF1O14727 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms