Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
CHL1O00533 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CHL1O00533 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
CHL1O00533 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
CHL1O00533 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC29.88■■■□□ 2.37
CHL1O00533 TMEM202-AS1-202ENST00000565181 2325 ntBASIC29.88■■■□□ 2.37
CHL1O00533 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CHL1O00533 AC135731.1-201ENST00000569415 2548 ntBASIC29.87■■■□□ 2.37
CHL1O00533 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHL1O00533 TFPT-201ENST00000391757 774 ntTSL 5 BASIC29.87■■■□□ 2.37
CHL1O00533 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHL1O00533 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC29.87■■■□□ 2.37
CHL1O00533 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC29.87■■■□□ 2.37
CHL1O00533 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
CHL1O00533 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CHL1O00533 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CHL1O00533 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CHL1O00533 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHL1O00533 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC29.85■■■□□ 2.37
CHL1O00533 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHL1O00533 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC29.84■■■□□ 2.37
CHL1O00533 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC29.84■■■□□ 2.37
CHL1O00533 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC29.84■■■□□ 2.37
CHL1O00533 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHL1O00533 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC29.84■■■□□ 2.37
CHL1O00533 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHL1O00533 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC29.83■■■□□ 2.37
CHL1O00533 EED-207ENST00000528180 1745 ntTSL 5 BASIC29.83■■■□□ 2.37
CHL1O00533 AL161729.1-201ENST00000604104 1402 ntBASIC29.83■■■□□ 2.37
CHL1O00533 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHL1O00533 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHL1O00533 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC29.83■■■□□ 2.37
CHL1O00533 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC29.83■■■□□ 2.37
CHL1O00533 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC29.82■■■□□ 2.36
CHL1O00533 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC29.82■■■□□ 2.36
CHL1O00533 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CHL1O00533 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC29.82■■■□□ 2.36
CHL1O00533 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CHL1O00533 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CHL1O00533 RPP21-222ENST00000433076 577 ntTSL 2 BASIC29.81■■■□□ 2.36
CHL1O00533 QDPR-206ENST00000508623 601 ntTSL 3 BASIC29.81■■■□□ 2.36
CHL1O00533 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CHL1O00533 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CHL1O00533 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.8■■■□□ 2.36
CHL1O00533 AL356740.2-201ENST00000601559 647 ntBASIC29.8■■■□□ 2.36
CHL1O00533 RASSF1-AS1-201ENST00000629828 790 ntBASIC29.8■■■□□ 2.36
CHL1O00533 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CHL1O00533 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CHL1O00533 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CHL1O00533 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
CHL1O00533 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
CHL1O00533 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC29.79■■■□□ 2.36
CHL1O00533 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CHL1O00533 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CHL1O00533 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CHL1O00533 AC131281.2-201ENST00000520478 145 ntBASIC29.79■■■□□ 2.36
CHL1O00533 SRR-208ENST00000576848 588 ntTSL 4 BASIC29.79■■■□□ 2.36
CHL1O00533 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC29.79■■■□□ 2.36
CHL1O00533 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29.79■■■□□ 2.36
CHL1O00533 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC29.79■■■□□ 2.36
CHL1O00533 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
CHL1O00533 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CHL1O00533 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CHL1O00533 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
CHL1O00533 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHL1O00533 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHL1O00533 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC29.78■■■□□ 2.36
CHL1O00533 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC29.78■■■□□ 2.36
CHL1O00533 AL512631.2-201ENST00000604634 923 ntBASIC29.78■■■□□ 2.36
CHL1O00533 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHL1O00533 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHL1O00533 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
CHL1O00533 REST-206ENST00000612429 1376 ntTSL 5 BASIC29.77■■■□□ 2.36
CHL1O00533 REST-207ENST00000616975 1370 ntTSL 5 BASIC29.77■■■□□ 2.36
CHL1O00533 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CHL1O00533 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CHL1O00533 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC29.77■■■□□ 2.36
CHL1O00533 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CHL1O00533 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.77■■■□□ 2.36
CHL1O00533 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CHL1O00533 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CHL1O00533 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CHL1O00533 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CHL1O00533 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC29.75■■■□□ 2.35
CHL1O00533 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.75■■■□□ 2.35
CHL1O00533 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CHL1O00533 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CHL1O00533 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CHL1O00533 AK3-203ENST00000447596 705 ntTSL 2 BASIC29.74■■■□□ 2.35
CHL1O00533 MIR4466-201ENST00000606121 54 ntBASIC29.74■■■□□ 2.35
CHL1O00533 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC29.74■■■□□ 2.35
CHL1O00533 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CHL1O00533 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC29.74■■■□□ 2.35
CHL1O00533 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CHL1O00533 AC005703.6-201ENST00000623265 1329 ntBASIC29.73■■■□□ 2.35
CHL1O00533 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CHL1O00533 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CHL1O00533 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
CHL1O00533 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CHL1O00533 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC29.73■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms