Protein–RNA interactions for Protein: J3KSC0

LINC01387, Putative uncharacterized protein encoded by LINC01387, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01387J3KSC0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01387J3KSC0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01387J3KSC0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01387J3KSC0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01387J3KSC0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.78■□□□□ 0.92
LINC01387J3KSC0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.78■□□□□ 0.92
LINC01387J3KSC0 MIR6724-1-201ENST00000616420 92 ntBASIC20.78■□□□□ 0.92
LINC01387J3KSC0 MIR6724-2-201ENST00000616483 92 ntBASIC20.78■□□□□ 0.92
LINC01387J3KSC0 MIR6724-4-201ENST00000617390 92 ntBASIC20.78■□□□□ 0.92
LINC01387J3KSC0 MIR6724-3-201ENST00000622482 92 ntBASIC20.78■□□□□ 0.92
LINC01387J3KSC0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01387J3KSC0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01387J3KSC0 HLA-L-211ENST00000482052 1765 ntBASIC20.77■□□□□ 0.92
LINC01387J3KSC0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC01387J3KSC0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC01387J3KSC0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LINC01387J3KSC0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC01387J3KSC0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC01387J3KSC0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LINC01387J3KSC0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC01387J3KSC0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01387J3KSC0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.76■□□□□ 0.91
LINC01387J3KSC0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01387J3KSC0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.76■□□□□ 0.91
LINC01387J3KSC0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01387J3KSC0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01387J3KSC0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.76■□□□□ 0.91
LINC01387J3KSC0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01387J3KSC0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01387J3KSC0 AC131274.2-201ENST00000580697 1507 ntBASIC20.76■□□□□ 0.91
LINC01387J3KSC0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01387J3KSC0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.76■□□□□ 0.91
LINC01387J3KSC0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01387J3KSC0 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.75■□□□□ 0.91
LINC01387J3KSC0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.75■□□□□ 0.91
LINC01387J3KSC0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.75■□□□□ 0.91
LINC01387J3KSC0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.75■□□□□ 0.91
LINC01387J3KSC0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC01387J3KSC0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.75■□□□□ 0.91
LINC01387J3KSC0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINC01387J3KSC0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC01387J3KSC0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.74■□□□□ 0.91
LINC01387J3KSC0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC01387J3KSC0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.74■□□□□ 0.91
LINC01387J3KSC0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.74■□□□□ 0.91
LINC01387J3KSC0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.74■□□□□ 0.91
LINC01387J3KSC0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LINC01387J3KSC0 AC138932.3-201ENST00000567634 1902 ntBASIC20.73■□□□□ 0.91
LINC01387J3KSC0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.73■□□□□ 0.91
LINC01387J3KSC0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.73■□□□□ 0.91
LINC01387J3KSC0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC01387J3KSC0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC01387J3KSC0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LINC01387J3KSC0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.72■□□□□ 0.91
LINC01387J3KSC0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC01387J3KSC0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LINC01387J3KSC0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LINC01387J3KSC0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LINC01387J3KSC0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.72■□□□□ 0.91
LINC01387J3KSC0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC01387J3KSC0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LINC01387J3KSC0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.71■□□□□ 0.91
LINC01387J3KSC0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.71■□□□□ 0.91
LINC01387J3KSC0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.71■□□□□ 0.91
LINC01387J3KSC0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC01387J3KSC0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC01387J3KSC0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.71■□□□□ 0.91
LINC01387J3KSC0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LINC01387J3KSC0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC01387J3KSC0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LINC01387J3KSC0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC01387J3KSC0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC01387J3KSC0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC01387J3KSC0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC01387J3KSC0 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.7■□□□□ 0.9
LINC01387J3KSC0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC01387J3KSC0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.7■□□□□ 0.9
LINC01387J3KSC0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.7■□□□□ 0.9
LINC01387J3KSC0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.7■□□□□ 0.9
LINC01387J3KSC0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.7■□□□□ 0.9
LINC01387J3KSC0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.69■□□□□ 0.9
LINC01387J3KSC0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01387J3KSC0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LINC01387J3KSC0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01387J3KSC0 AL356740.2-201ENST00000601559 647 ntBASIC20.69■□□□□ 0.9
LINC01387J3KSC0 AC131212.1-201ENST00000613771 668 ntBASIC20.69■□□□□ 0.9
LINC01387J3KSC0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.69■□□□□ 0.9
LINC01387J3KSC0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01387J3KSC0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01387J3KSC0 AC005703.6-201ENST00000623265 1329 ntBASIC20.69■□□□□ 0.9
LINC01387J3KSC0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
LINC01387J3KSC0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LINC01387J3KSC0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.68■□□□□ 0.9
LINC01387J3KSC0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC01387J3KSC0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC01387J3KSC0 AC141586.4-201ENST00000624558 1573 ntBASIC20.68■□□□□ 0.9
LINC01387J3KSC0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC01387J3KSC0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC01387J3KSC0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC01387J3KSC0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms