Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
UPK3BL1B0FP48 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
UPK3BL1B0FP48 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
UPK3BL1B0FP48 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
UPK3BL1B0FP48 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
UPK3BL1B0FP48 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
UPK3BL1B0FP48 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
UPK3BL1B0FP48 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
UPK3BL1B0FP48 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.27■■□□□ 1.32
UPK3BL1B0FP48 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.27■■□□□ 1.32
UPK3BL1B0FP48 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UPK3BL1B0FP48 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
UPK3BL1B0FP48 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UPK3BL1B0FP48 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
UPK3BL1B0FP48 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
UPK3BL1B0FP48 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UPK3BL1B0FP48 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.26■■□□□ 1.31
UPK3BL1B0FP48 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.26■■□□□ 1.31
UPK3BL1B0FP48 AC106739.1-201ENST00000617035 715 ntBASIC23.26■■□□□ 1.31
UPK3BL1B0FP48 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UPK3BL1B0FP48 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UPK3BL1B0FP48 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
UPK3BL1B0FP48 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.26■■□□□ 1.31
UPK3BL1B0FP48 AC020928.2-201ENST00000588717 2197 ntBASIC23.25■■□□□ 1.31
UPK3BL1B0FP48 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
UPK3BL1B0FP48 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
UPK3BL1B0FP48 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
UPK3BL1B0FP48 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
UPK3BL1B0FP48 ZNRF2P3-201ENST00000424200 374 ntBASIC23.25■■□□□ 1.31
UPK3BL1B0FP48 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.25■■□□□ 1.31
UPK3BL1B0FP48 SNX5-217ENST00000606557 1087 ntBASIC23.25■■□□□ 1.31
UPK3BL1B0FP48 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.25■■□□□ 1.31
UPK3BL1B0FP48 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
UPK3BL1B0FP48 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
UPK3BL1B0FP48 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
UPK3BL1B0FP48 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
UPK3BL1B0FP48 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
UPK3BL1B0FP48 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.24■■□□□ 1.31
UPK3BL1B0FP48 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
UPK3BL1B0FP48 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.24■■□□□ 1.31
UPK3BL1B0FP48 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.24■■□□□ 1.31
UPK3BL1B0FP48 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.24■■□□□ 1.31
UPK3BL1B0FP48 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.24■■□□□ 1.31
UPK3BL1B0FP48 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.24■■□□□ 1.31
UPK3BL1B0FP48 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UPK3BL1B0FP48 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UPK3BL1B0FP48 AC142381.3-201ENST00000568208 1670 ntBASIC23.23■■□□□ 1.31
UPK3BL1B0FP48 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
UPK3BL1B0FP48 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
UPK3BL1B0FP48 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
UPK3BL1B0FP48 AC026271.2-201ENST00000428091 497 ntBASIC23.23■■□□□ 1.31
UPK3BL1B0FP48 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.23■■□□□ 1.31
UPK3BL1B0FP48 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
UPK3BL1B0FP48 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
UPK3BL1B0FP48 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UPK3BL1B0FP48 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
UPK3BL1B0FP48 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
UPK3BL1B0FP48 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UPK3BL1B0FP48 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.22■■□□□ 1.31
UPK3BL1B0FP48 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.22■■□□□ 1.31
UPK3BL1B0FP48 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.22■■□□□ 1.31
UPK3BL1B0FP48 AP003733.4-201ENST00000623785 1697 ntBASIC23.22■■□□□ 1.31
UPK3BL1B0FP48 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
UPK3BL1B0FP48 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
UPK3BL1B0FP48 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UPK3BL1B0FP48 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UPK3BL1B0FP48 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.21■■□□□ 1.31
UPK3BL1B0FP48 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
UPK3BL1B0FP48 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UPK3BL1B0FP48 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UPK3BL1B0FP48 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UPK3BL1B0FP48 AC135731.1-201ENST00000569415 2548 ntBASIC23.2■■□□□ 1.3
UPK3BL1B0FP48 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UPK3BL1B0FP48 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.2■■□□□ 1.3
UPK3BL1B0FP48 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.2■■□□□ 1.3
UPK3BL1B0FP48 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.2■■□□□ 1.3
UPK3BL1B0FP48 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.2■■□□□ 1.3
UPK3BL1B0FP48 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UPK3BL1B0FP48 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UPK3BL1B0FP48 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UPK3BL1B0FP48 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.2■■□□□ 1.3
UPK3BL1B0FP48 AC142381.2-201ENST00000566120 298 ntBASIC23.2■■□□□ 1.3
UPK3BL1B0FP48 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UPK3BL1B0FP48 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UPK3BL1B0FP48 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
UPK3BL1B0FP48 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
UPK3BL1B0FP48 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
UPK3BL1B0FP48 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.19■■□□□ 1.3
UPK3BL1B0FP48 AC004448.1-201ENST00000458332 883 ntBASIC23.19■■□□□ 1.3
UPK3BL1B0FP48 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
UPK3BL1B0FP48 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.19■■□□□ 1.3
UPK3BL1B0FP48 HLA-L-211ENST00000482052 1765 ntBASIC23.19■■□□□ 1.3
UPK3BL1B0FP48 AC131274.2-201ENST00000580697 1507 ntBASIC23.18■■□□□ 1.3
UPK3BL1B0FP48 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
UPK3BL1B0FP48 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.18■■□□□ 1.3
UPK3BL1B0FP48 AC138932.3-201ENST00000567634 1902 ntBASIC23.18■■□□□ 1.3
UPK3BL1B0FP48 PBX2P1-201ENST00000493219 1291 ntBASIC23.18■■□□□ 1.3
UPK3BL1B0FP48 AC104564.3-201ENST00000582367 638 ntBASIC23.18■■□□□ 1.3
UPK3BL1B0FP48 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.18■■□□□ 1.3
UPK3BL1B0FP48 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms