Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM49BA6NDI0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM49BA6NDI0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
TRIM49BA6NDI0 AC019171.1-201ENST00000601251 1056 ntBASIC25.39■■□□□ 1.66
TRIM49BA6NDI0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
TRIM49BA6NDI0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM49BA6NDI0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TRIM49BA6NDI0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.65
TRIM49BA6NDI0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
TRIM49BA6NDI0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.38■■□□□ 1.65
TRIM49BA6NDI0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM49BA6NDI0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM49BA6NDI0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.38■■□□□ 1.65
TRIM49BA6NDI0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM49BA6NDI0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM49BA6NDI0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM49BA6NDI0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
TRIM49BA6NDI0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.38■■□□□ 1.65
TRIM49BA6NDI0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
TRIM49BA6NDI0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.37■■□□□ 1.65
TRIM49BA6NDI0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.37■■□□□ 1.65
TRIM49BA6NDI0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM49BA6NDI0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
TRIM49BA6NDI0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.37■■□□□ 1.65
TRIM49BA6NDI0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM49BA6NDI0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM49BA6NDI0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.37■■□□□ 1.65
TRIM49BA6NDI0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM49BA6NDI0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
TRIM49BA6NDI0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM49BA6NDI0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM49BA6NDI0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM49BA6NDI0 DUSP8P5-201ENST00000422884 1815 ntBASIC25.36■■□□□ 1.65
TRIM49BA6NDI0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.36■■□□□ 1.65
TRIM49BA6NDI0 BHLHE23-202ENST00000612929 1109 ntBASIC25.36■■□□□ 1.65
TRIM49BA6NDI0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM49BA6NDI0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.36■■□□□ 1.65
TRIM49BA6NDI0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.36■■□□□ 1.65
TRIM49BA6NDI0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM49BA6NDI0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.35■■□□□ 1.65
TRIM49BA6NDI0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM49BA6NDI0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.35■■□□□ 1.65
TRIM49BA6NDI0 AC011551.1-201ENST00000614101 683 ntBASIC25.35■■□□□ 1.65
TRIM49BA6NDI0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM49BA6NDI0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.35■■□□□ 1.65
TRIM49BA6NDI0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM49BA6NDI0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM49BA6NDI0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM49BA6NDI0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
TRIM49BA6NDI0 TSPY13P-201ENST00000338964 914 ntBASIC25.34■■□□□ 1.65
TRIM49BA6NDI0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.34■■□□□ 1.65
TRIM49BA6NDI0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM49BA6NDI0 AC010980.1-201ENST00000587192 1142 ntBASIC25.34■■□□□ 1.65
TRIM49BA6NDI0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM49BA6NDI0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM49BA6NDI0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM49BA6NDI0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM49BA6NDI0 C9orf163-202ENST00000624034 2573 ntBASIC25.33■■□□□ 1.65
TRIM49BA6NDI0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.33■■□□□ 1.65
TRIM49BA6NDI0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
TRIM49BA6NDI0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.33■■□□□ 1.65
TRIM49BA6NDI0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.33■■□□□ 1.65
TRIM49BA6NDI0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.33■■□□□ 1.65
TRIM49BA6NDI0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.33■■□□□ 1.65
TRIM49BA6NDI0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
TRIM49BA6NDI0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
TRIM49BA6NDI0 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.32■■□□□ 1.64
TRIM49BA6NDI0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM49BA6NDI0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.31■■□□□ 1.64
TRIM49BA6NDI0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM49BA6NDI0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
TRIM49BA6NDI0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM49BA6NDI0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.31■■□□□ 1.64
TRIM49BA6NDI0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.31■■□□□ 1.64
TRIM49BA6NDI0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
TRIM49BA6NDI0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM49BA6NDI0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.31■■□□□ 1.64
TRIM49BA6NDI0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM49BA6NDI0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM49BA6NDI0 AC131274.2-201ENST00000580697 1507 ntBASIC25.31■■□□□ 1.64
TRIM49BA6NDI0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM49BA6NDI0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.3■■□□□ 1.64
TRIM49BA6NDI0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM49BA6NDI0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.3■■□□□ 1.64
TRIM49BA6NDI0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM49BA6NDI0 AC068473.5-201ENST00000616428 2072 ntBASIC25.3■■□□□ 1.64
TRIM49BA6NDI0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.3■■□□□ 1.64
TRIM49BA6NDI0 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.29■■□□□ 1.64
TRIM49BA6NDI0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM49BA6NDI0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM49BA6NDI0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.29■■□□□ 1.64
TRIM49BA6NDI0 AC022616.5-201ENST00000518796 181 ntBASIC25.29■■□□□ 1.64
TRIM49BA6NDI0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.29■■□□□ 1.64
TRIM49BA6NDI0 AC120024.1-201ENST00000562672 995 ntBASIC25.29■■□□□ 1.64
TRIM49BA6NDI0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.29■■□□□ 1.64
TRIM49BA6NDI0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM49BA6NDI0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.29■■□□□ 1.64
TRIM49BA6NDI0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM49BA6NDI0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
TRIM49BA6NDI0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms