Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 AC131274.2-201ENST00000580697 1507 ntBASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 MIR4281-201ENST00000580852 62 ntBASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 AF131216.4-201ENST00000638924 1588 ntBASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.37■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 THA1P-201ENST00000590384 1145 ntBASIC20.37■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.35■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 AC103724.3-201ENST00000564481 992 ntBASIC20.35■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.35■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.34■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.34■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 AL022069.1-201ENST00000568025 1636 ntBASIC20.32■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.32■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.32■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.32■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.32■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.31■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.31■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 YBX1P4-201ENST00000392794 808 ntBASIC20.31■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.31■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.31■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 AL161729.1-201ENST00000604104 1402 ntBASIC20.3■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.3■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.3■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.3■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
IGKV1D-43A0A0B4J1Z2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms