Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRAV27A0A087WT01 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV27A0A087WT01 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRAV27A0A087WT01 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV27A0A087WT01 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TRAV27A0A087WT01 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV27A0A087WT01 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV27A0A087WT01 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRAV27A0A087WT01 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV27A0A087WT01 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV27A0A087WT01 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV27A0A087WT01 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.79■□□□□ 0.92
TRAV27A0A087WT01 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV27A0A087WT01 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV27A0A087WT01 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV27A0A087WT01 DUX4L18-201ENST00000553347 1267 ntBASIC20.79■□□□□ 0.92
TRAV27A0A087WT01 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV27A0A087WT01 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV27A0A087WT01 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.79■□□□□ 0.92
TRAV27A0A087WT01 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV27A0A087WT01 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV27A0A087WT01 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV27A0A087WT01 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAV27A0A087WT01 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV27A0A087WT01 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRAV27A0A087WT01 ABHD17AP5-201ENST00000580133 923 ntBASIC20.78■□□□□ 0.92
TRAV27A0A087WT01 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV27A0A087WT01 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
TRAV27A0A087WT01 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV27A0A087WT01 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TRAV27A0A087WT01 C9orf163-202ENST00000624034 2573 ntBASIC20.77■□□□□ 0.91
TRAV27A0A087WT01 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAV27A0A087WT01 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
TRAV27A0A087WT01 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRAV27A0A087WT01 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAV27A0A087WT01 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAV27A0A087WT01 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV27A0A087WT01 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.76■□□□□ 0.91
TRAV27A0A087WT01 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRAV27A0A087WT01 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TRAV27A0A087WT01 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV27A0A087WT01 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAV27A0A087WT01 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV27A0A087WT01 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV27A0A087WT01 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAV27A0A087WT01 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV27A0A087WT01 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TRAV27A0A087WT01 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV27A0A087WT01 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV27A0A087WT01 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV27A0A087WT01 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRAV27A0A087WT01 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV27A0A087WT01 NTF6A-201ENST00000591175 560 ntBASIC20.75■□□□□ 0.91
TRAV27A0A087WT01 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAV27A0A087WT01 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAV27A0A087WT01 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAV27A0A087WT01 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRAV27A0A087WT01 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV27A0A087WT01 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV27A0A087WT01 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV27A0A087WT01 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAV27A0A087WT01 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV27A0A087WT01 AC139795.1-202ENST00000500444 432 ntBASIC20.74■□□□□ 0.91
TRAV27A0A087WT01 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAV27A0A087WT01 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAV27A0A087WT01 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV27A0A087WT01 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV27A0A087WT01 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV27A0A087WT01 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV27A0A087WT01 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.73■□□□□ 0.91
TRAV27A0A087WT01 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV27A0A087WT01 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV27A0A087WT01 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV27A0A087WT01 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
TRAV27A0A087WT01 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV27A0A087WT01 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV27A0A087WT01 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAV27A0A087WT01 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TRAV27A0A087WT01 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV27A0A087WT01 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV27A0A087WT01 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV27A0A087WT01 AC012676.1-201ENST00000574705 1949 ntBASIC20.72■□□□□ 0.91
TRAV27A0A087WT01 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV27A0A087WT01 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV27A0A087WT01 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms