Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 AC012441.1-201ENST00000446669 685 ntBASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 TDH-203ENST00000531764 1110 ntBASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 PTP4A1P2-201ENST00000546033 454 ntBASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCMF1Q9P0J7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 EIF3FP3-201ENST00000434851 1086 ntBASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 AC022616.1-201ENST00000518688 554 ntBASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 AC068587.3-201ENST00000526613 355 ntBASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 AC134312.5-201ENST00000568031 1313 ntBASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
KCMF1Q9P0J7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 KRT18P25-201ENST00000508931 1278 ntBASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 AP001889.1-201ENST00000525414 633 ntBASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
KCMF1Q9P0J7 KRT8P35-201ENST00000483942 1338 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms