Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 AC023157.3-201ENST00000619086 2088 ntBASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 HYMAI-201ENST00000635591 3347 ntBASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 AL627389.1-201ENST00000413508 1182 ntBASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 PUDPP3-201ENST00000445368 636 ntBASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 KRT18P66-201ENST00000452970 1269 ntBASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 RN7SL8P-201ENST00000461771 266 ntBASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 AC023090.2-201ENST00000625182 2110 ntBASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PDLIM7Q9NR12 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 AL160314.3-201ENST00000556041 767 ntBASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 AGAP7P-201ENST00000582299 2062 ntBASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 AGAP14-201ENST00000624701 2060 ntBASIC16.71■□□□□ 0.27
PDLIM7Q9NR12 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PDLIM7Q9NR12 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.71■□□□□ 0.26
PDLIM7Q9NR12 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms