Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 KRT8P14-201ENST00000414254 1442 ntBASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TM9SF3Q9HD45 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 FAM8A4P-201ENST00000435433 1213 ntBASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 POM121L10P-201ENST00000436994 1285 ntBASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 HSPB1P2-201ENST00000448722 546 ntBASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 BX284668.4-201ENST00000453917 508 ntBASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 AP003680.1-201ENST00000598970 3660 ntBASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF3Q9HD45 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 AC087481.3-201ENST00000602886 1894 ntBASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 AP002414.2-201ENST00000591780 3365 ntBASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 AC084364.1-201ENST00000551967 1556 ntBASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 AC079178.1-201ENST00000420915 656 ntBASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.12■□□□□ 0.01
TM9SF3Q9HD45 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms