Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.08■□□□□ 0.49
RTFDC1Q9BY42 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RTFDC1Q9BY42 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.08■□□□□ 0.49
RTFDC1Q9BY42 C18orf15-201ENST00000623680 2534 ntBASIC18.08■□□□□ 0.49
RTFDC1Q9BY42 ZBED1P1-201ENST00000502364 1930 ntBASIC18.08■□□□□ 0.49
RTFDC1Q9BY42 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTFDC1Q9BY42 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 MIR557-201ENST00000385239 98 ntBASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 AL592076.1-201ENST00000424448 303 ntBASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 RPL17P45-201ENST00000586289 509 ntBASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 AC023090.2-201ENST00000625182 2110 ntBASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RTFDC1Q9BY42 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 AP000845.1-201ENST00000581677 2131 ntBASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 AP000356.3-201ENST00000382243 753 ntBASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 AC007881.3-201ENST00000608897 607 ntBASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 AC136621.1-201ENST00000624017 2304 ntBASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RTFDC1Q9BY42 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 AL512430.1-201ENST00000392575 860 ntBASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.06■□□□□ 0.48
RTFDC1Q9BY42 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms