Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 AC006486.2-201ENST00000624246 2199 ntBASIC17.56■□□□□ 0.4
SLF1Q9BQI6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 AL360270.3-201ENST00000609118 1348 ntBASIC17.56■□□□□ 0.4
SLF1Q9BQI6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 AC079178.1-201ENST00000420915 656 ntBASIC17.56■□□□□ 0.4
SLF1Q9BQI6 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 GHSR-202ENST00000427970 912 ntBASIC17.56■□□□□ 0.4
SLF1Q9BQI6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 AL391280.1-201ENST00000506969 1062 ntBASIC17.56■□□□□ 0.4
SLF1Q9BQI6 AP003171.2-201ENST00000528208 925 ntBASIC17.56■□□□□ 0.4
SLF1Q9BQI6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 AL606495.2-201ENST00000605867 535 ntBASIC17.56■□□□□ 0.4
SLF1Q9BQI6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLF1Q9BQI6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 MIR663B-201ENST00000408361 115 ntBASIC17.55■□□□□ 0.4
SLF1Q9BQI6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.55■□□□□ 0.4
SLF1Q9BQI6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 HSPB1P2-201ENST00000448722 546 ntBASIC17.55■□□□□ 0.4
SLF1Q9BQI6 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 AC106820.3-201ENST00000561653 397 ntBASIC17.55■□□□□ 0.4
SLF1Q9BQI6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 AC004466.1-201ENST00000599515 1080 ntBASIC17.55■□□□□ 0.4
SLF1Q9BQI6 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 AL139099.5-201ENST00000635274 300 ntBASIC17.55■□□□□ 0.4
SLF1Q9BQI6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 AL157414.3-201ENST00000624276 1954 ntBASIC17.55■□□□□ 0.4
SLF1Q9BQI6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLF1Q9BQI6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLF1Q9BQI6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLF1Q9BQI6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms