Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.77■□□□□ 0.12
SMOQ99835 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.77■□□□□ 0.12
SMOQ99835 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SMOQ99835 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 FAM86MP-201ENST00000340703 885 ntBASIC15.77■□□□□ 0.12
SMOQ99835 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 MIR326-201ENST00000362220 95 ntBASIC15.77■□□□□ 0.12
SMOQ99835 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.77■□□□□ 0.12
SMOQ99835 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.77■□□□□ 0.12
SMOQ99835 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.77■□□□□ 0.12
SMOQ99835 ACTBP11-201ENST00000436287 1126 ntBASIC15.77■□□□□ 0.12
SMOQ99835 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.77■□□□□ 0.12
SMOQ99835 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.77■□□□□ 0.12
SMOQ99835 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.77■□□□□ 0.12
SMOQ99835 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.77■□□□□ 0.12
SMOQ99835 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SMOQ99835 AC092658.1-201ENST00000505836 891 ntBASIC15.77■□□□□ 0.12
SMOQ99835 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.77■□□□□ 0.12
SMOQ99835 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.77■□□□□ 0.12
SMOQ99835 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.77■□□□□ 0.12
SMOQ99835 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.77■□□□□ 0.12
SMOQ99835 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.77■□□□□ 0.12
SMOQ99835 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMOQ99835 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMOQ99835 LINC01101-201ENST00000622953 1884 ntBASIC15.77■□□□□ 0.11
SMOQ99835 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMOQ99835 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.77■□□□□ 0.11
SMOQ99835 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SMOQ99835 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMOQ99835 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SMOQ99835 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMOQ99835 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SMOQ99835 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMOQ99835 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMOQ99835 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMOQ99835 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SMOQ99835 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
SMOQ99835 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
SMOQ99835 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMOQ99835 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
SMOQ99835 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMOQ99835 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
SMOQ99835 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMOQ99835 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMOQ99835 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SMOQ99835 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMOQ99835 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMOQ99835 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.76■□□□□ 0.11
SMOQ99835 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.76■□□□□ 0.11
SMOQ99835 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMOQ99835 Z93015.1-201ENST00000451718 390 ntBASIC15.76■□□□□ 0.11
SMOQ99835 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.76■□□□□ 0.11
SMOQ99835 RPSAP36-202ENST00000494591 1261 ntBASIC15.76■□□□□ 0.11
SMOQ99835 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SMOQ99835 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.76■□□□□ 0.11
SMOQ99835 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.76■□□□□ 0.11
SMOQ99835 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.76■□□□□ 0.11
SMOQ99835 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.76■□□□□ 0.11
SMOQ99835 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.76■□□□□ 0.11
SMOQ99835 AL358472.3-201ENST00000608147 415 ntBASIC15.76■□□□□ 0.11
SMOQ99835 AC002472.3-201ENST00000640124 621 ntBASIC15.76■□□□□ 0.11
SMOQ99835 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMOQ99835 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMOQ99835 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.76■□□□□ 0.11
SMOQ99835 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.76■□□□□ 0.11
SMOQ99835 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.76■□□□□ 0.11
SMOQ99835 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SMOQ99835 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SMOQ99835 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMOQ99835 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMOQ99835 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMOQ99835 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.76■□□□□ 0.11
SMOQ99835 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
SMOQ99835 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SMOQ99835 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMOQ99835 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.75■□□□□ 0.11
SMOQ99835 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.75■□□□□ 0.11
SMOQ99835 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SMOQ99835 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.75■□□□□ 0.11
SMOQ99835 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SMOQ99835 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SMOQ99835 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMOQ99835 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms