Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
NOTCH4Q99466 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.24■□□□□ 0.03
NOTCH4Q99466 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.24■□□□□ 0.03
NOTCH4Q99466 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH4Q99466 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.24■□□□□ 0.03
NOTCH4Q99466 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH4Q99466 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.24■□□□□ 0.03
NOTCH4Q99466 AL162727.3-201ENST00000635661 2787 ntBASIC15.24■□□□□ 0.03
NOTCH4Q99466 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NOTCH4Q99466 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NOTCH4Q99466 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 AC130709.1-201ENST00000484779 1212 ntBASIC15.23■□□□□ 0.03
NOTCH4Q99466 AC003686.1-201ENST00000550956 1034 ntBASIC15.23■□□□□ 0.03
NOTCH4Q99466 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.23■□□□□ 0.03
NOTCH4Q99466 AHCYP4-201ENST00000419201 1315 ntBASIC15.23■□□□□ 0.03
NOTCH4Q99466 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NOTCH4Q99466 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 LINC00554-201ENST00000564841 3011 ntBASIC15.22■□□□□ 0.03
NOTCH4Q99466 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.22■□□□□ 0.03
NOTCH4Q99466 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 MIR6769A-201ENST00000617340 73 ntBASIC15.22■□□□□ 0.03
NOTCH4Q99466 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 BANF1P3-201ENST00000412556 261 ntBASIC15.22■□□□□ 0.03
NOTCH4Q99466 RN7SL81P-201ENST00000493781 261 ntBASIC15.22■□□□□ 0.03
NOTCH4Q99466 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 AP001065.2-201ENST00000617205 644 ntBASIC15.22■□□□□ 0.03
NOTCH4Q99466 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NOTCH4Q99466 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NOTCH4Q99466 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms