Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 CICP23-201ENST00000605013 2741 ntBASIC12.56□□□□□ -0.4
GAFA1Q96PS6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.56□□□□□ -0.4
GAFA1Q96PS6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 POM121L8P-201ENST00000417732 1281 ntBASIC12.55□□□□□ -0.4
GAFA1Q96PS6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.55□□□□□ -0.4
GAFA1Q96PS6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 U91328.1-201ENST00000437528 223 ntBASIC12.55□□□□□ -0.4
GAFA1Q96PS6 POM121L9P-203ENST00000441984 1285 ntBASIC12.55□□□□□ -0.4
GAFA1Q96PS6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 AL590640.2-201ENST00000457038 527 ntBASIC12.55□□□□□ -0.4
GAFA1Q96PS6 CROCCP4-201ENST00000457096 498 ntBASIC12.55□□□□□ -0.4
GAFA1Q96PS6 AC007551.1-201ENST00000457394 519 ntBASIC12.55□□□□□ -0.4
GAFA1Q96PS6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 AC106886.1-201ENST00000568660 600 ntBASIC12.55□□□□□ -0.4
GAFA1Q96PS6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 ECM1P1-201ENST00000604092 1279 ntBASIC12.55□□□□□ -0.4
GAFA1Q96PS6 AC132938.4-201ENST00000623835 848 ntBASIC12.55□□□□□ -0.4
GAFA1Q96PS6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 AC018442.1-201ENST00000421439 2061 ntBASIC12.55□□□□□ -0.4
GAFA1Q96PS6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GAFA1Q96PS6 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 CICP14-201ENST00000629111 2732 ntBASIC12.54□□□□□ -0.4
GAFA1Q96PS6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms