Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 MIR1908-201ENST00000410394 80 ntBASIC14.35□□□□□ -0.11
TM9SF4Q92544 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 AC026410.3-201ENST00000514280 936 ntBASIC14.35□□□□□ -0.11
TM9SF4Q92544 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 AC005252.2-201ENST00000624630 1141 ntBASIC14.35□□□□□ -0.11
TM9SF4Q92544 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 AGAP7P-201ENST00000582299 2062 ntBASIC14.35□□□□□ -0.11
TM9SF4Q92544 AGAP14-201ENST00000624701 2060 ntBASIC14.35□□□□□ -0.11
TM9SF4Q92544 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 AC020907.1-201ENST00000616460 1350 ntBASIC14.34□□□□□ -0.11
TM9SF4Q92544 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.34□□□□□ -0.11
TM9SF4Q92544 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 AC022137.2-201ENST00000503482 481 ntBASIC14.34□□□□□ -0.11
TM9SF4Q92544 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 KRT90P-201ENST00000549264 1064 ntBASIC14.34□□□□□ -0.11
TM9SF4Q92544 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 AC103810.3-201ENST00000583567 96 ntBASIC14.34□□□□□ -0.11
TM9SF4Q92544 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 MIR6787-201ENST00000616675 61 ntBASIC14.34□□□□□ -0.11
TM9SF4Q92544 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 CICP4-201ENST00000447359 2812 ntBASIC14.34□□□□□ -0.11
TM9SF4Q92544 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TM9SF4Q92544 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.34□□□□□ -0.11
TM9SF4Q92544 AL607033.1-201ENST00000623900 1599 ntBASIC14.34□□□□□ -0.11
TM9SF4Q92544 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms