Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 U91328.1-201ENST00000437528 223 ntBASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 AL162726.2-201ENST00000438986 1017 ntBASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 AC093433.1-201ENST00000458048 571 ntBASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 AC011495.1-201ENST00000498085 584 ntBASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 AP001063.1-201ENST00000568332 529 ntBASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 AL008721.1-201ENST00000609964 604 ntBASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 RPSAP52-203ENST00000622976 1023 ntBASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 AL033527.5-201ENST00000641382 801 ntBASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 AC055811.4-201ENST00000624039 1754 ntBASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 AC139749.1-202ENST00000617529 3139 ntBASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 AL136379.1-201ENST00000623471 2642 ntBASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 AC097359.2-201ENST00000604992 2389 ntBASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 AC026748.1-201ENST00000624349 3251 ntBASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 MSTO2P-201ENST00000314835 1709 ntBASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDH19Q8TAB3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 ACTBP8-201ENST00000403258 1108 ntBASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDH19Q8TAB3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms